DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and CG3902

DIOPT Version :9

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster


Alignment Length:379 Identity:142/379 - (37%)
Similarity:226/379 - (59%) Gaps:2/379 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LAALSETHQILQKTCREFANAELAPKARHHDREELYPAEQVRRLGELGLMSVTVREEYGGSGLDY 98
            |..|::..:::::|..:.|..::.|..:..|.|..:....|:.:.|.|||.:.:..|.||||.::
  Fly    34 LTFLTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSGCNF 98

  Fly    99 QAYAIGMEEVARGDAAVSIVMGVNNLYLGAVQ-QHGTEQQKQDFLVPYTQGEHIAFYALSEPGNG 162
            ....:.:||:::.|.||:..:.::|..:.::. :.|..:||..:| |....|:...:||:|||.|
  Fly    99 MTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYL-PKLAQEYAGSFALTEPGAG 162

  Fly   163 SDAGAASTTAKLQGDSYQINGTKAWISNSKEASGGIVFATVDKSMKHKGITAFLTPKDVPGLSIA 227
            |||.:..|.||..|..|.|||:|.|||||..|...::||.......::|||.|:..::.|||.:.
  Fly   163 SDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRGITTFIVDRETPGLIVN 227

  Fly   228 KKESKMGMRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELA 292
            |.|.|:|:||:.||||..::|.||...:||..|.|:|.|...|:.||||||||..|:||...:..
  Fly   228 KPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDAT 292

  Fly   293 VDYSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDNGLPITKEAAMAKLHASES 357
            :.|..:|..||..:...|.:|.::|.:||.:|.:||:|:.||.|::.|:|..|||||||.:|||.
  Fly   293 IPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYASEV 357

  Fly   358 ATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLRE 411
            |...|.:|:..:||:|:|.|.|.|.|||:.::..|||||:.:|...||..:.::
  Fly   358 AQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKKD 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 CaiA 37..414 CDD:224871 141/376 (38%)
SCAD_SBCAD 39..410 CDD:173847 140/371 (38%)
CG3902NP_649069.2 CaiA 37..414 CDD:224871 141/376 (38%)
SCAD_SBCAD 39..410 CDD:173847 140/371 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460756
Domainoid 1 1.000 97 1.000 Domainoid score I372
eggNOG 1 0.900 - - E1_COG1960
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 183 1.000 Inparanoid score I179
Isobase 1 0.950 - 0 Normalized mean entropy S1951
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 1 1.000 - - FOG0000508
OrthoInspector 1 1.000 - - mtm9754
orthoMCL 1 0.900 - - OOG6_102170
Panther 1 1.100 - - P PTHR43884
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
1110.750

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