DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4860 and acadl

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_957475.1 Gene:acadl / 394156 ZFINID:ZDB-GENE-040426-771 Length:442 Species:Danio rerio


Alignment Length:393 Identity:120/393 - (30%)
Similarity:190/393 - (48%) Gaps:23/393 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GNRGIACLAALSETHQILQKTCREFANAELAPKARHHDREELYPAEQVRRLGELGLMSVTVREEY 91
            |.|.|     .||.|.:.::..|.|...|:||.....::......|...:.||.||:.|...||:
Zfish    60 GTRRI-----FSEEHDLFRQNVRRFFQEEVAPYHAQWEKAGEVSREVWEKAGEHGLLGVYTPEEH 119

  Fly    92 GGSGLDYQAYAIGMEEVARGDAAVSIVMGVNNLYLGAVQQHGTEQQKQDFLVPYTQGEHIAFYAL 156
            ||.|.|..:.||..||....:.:.......:.:.:..:..:|::.|.:.::.....|:.|...|:
Zfish   120 GGIGGDLLSAAIVWEEQMYSNCSGPGFSLHSEIVMPYISHYGSKAQIERYIPQMAAGKCIGAIAM 184

  Fly   157 SEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSKEASGGIVFATVDKSMK---HKGITAFLTP 218
            :|||.|||...|.|.||..|..:.:||:|.:|:|...:...||.|..|:..|   | ||:.||..
Zfish   185 TEPGAGSDLQGAKTFAKKDGTDWILNGSKVFITNGWMSDVVIVVAVTDREAKTAAH-GISLFLVD 248

  Fly   219 KDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATG 283
            :...|....:|..|:|::|..|.:|..|||.:|...:||....||...|..|...|:.||.....
Zfish   249 RGTKGYQKGRKLEKLGLKAQDTAELFFEDVRLPAEALLGQVNKGFYYLMNELPQERLLIAVMGLA 313

  Fly   284 IAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDNGLPITKE-- 346
            ..:...|.:.:|..:|.|||:.:|.||::|.|||::.|.:.:.|...       |:.|.:..|  
Zfish   314 SCEFMFEESRNYVMQRKAFGRTIADLQVVQHKLAELKTEICVGRAFI-------DSCLQLHSEKK 371

  Fly   347 -----AAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIAN 406
                 |:|||..|::.....|.||:|:.||.||..:.|....:.:|||..||.||:||.:.:|:.
Zfish   372 LDSSTASMAKYWATDLQNRVATQCLQLHGGWGYMWEYPIAKAFADARVQPIYGGTNEIMKELISR 436

  Fly   407 AVL 409
            .::
Zfish   437 NIV 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 116/381 (30%)
acadlNP_957475.1 LCAD 67..439 CDD:173849 116/379 (31%)

Return to query results.
Submit another query.