DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4860 and acad8

DIOPT Version :9

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_957449.1 Gene:acad8 / 394130 ZFINID:ZDB-GENE-040426-828 Length:418 Species:Danio rerio


Alignment Length:415 Identity:153/415 - (36%)
Similarity:227/415 - (54%) Gaps:10/415 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIRVARTLGQRSSGAWSARIIAG-GNRGI-ACL---AALSETHQILQKTCREFANAELAPKARHH 63
            |||..| ||..|.|...:.|... ..||| ||:   ..|::..:..||...:||..|:||.....
Zfish     6 LIRGVR-LGSNSIGRPRSLIFNSLHRRGIAACIDPSIGLTDEQKEFQKVAFDFAANEMAPHMAEW 69

  Fly    64 DREELYPAEQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSIVMGVNNLYLGA 128
            |::|::|.|.:|:..|||...:.|..:.|||||.....:|..|.::.|..:.:..:.::|:....
Zfish    70 DQKEIFPVEAMRKAAELGFGGIYVNPDVGGSGLSRLDTSIIFEALSTGCVSTTAYVSIHNMCAWM 134

  Fly   129 VQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSKE 193
            :...|..:|::.|.......:..|.|.|:|||:||||.:..|:|.|:||.|.:||:||:||...:
Zfish   135 IDTFGNNEQRERFCPDLCSMQKFASYCLTEPGSGSDAASLLTSATLKGDHYILNGSKAFISGGGD 199

  Fly   194 ASGGIVFA-TVDKSMKHKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLG 257
            ....:|.. |..|.  .|||:..:..|..||||..|||.|:|..:..|..::.||..||.:..||
Zfish   200 TDVYVVMCRTGGKG--PKGISCLVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVTNRLG 262

  Fly   258 AAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATR 322
            ..|.||.|||:.|:.|||.||:.:.|.|.|::.||.|:...|..||:.||..|.:|.|||:|||:
Zfish   263 TEGQGFSIAMKGLNGGRINIASCSLGAAHASVLLARDHMCVRKQFGETLANSQFLQFKLAEMATK 327

  Fly   323 VEISRLLTWRAAWLKDNGLP-ITKEAAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRN 386
            :..||||..:||....:|.| .....:||||..::......:|.:||.||.||..|...:.|.|:
Zfish   328 LVASRLLVRQAALALQDGRPDAVSLCSMAKLFVTDECFSICNQALQIHGGYGYLKDYAVQQYVRD 392

  Fly   387 ARVTEIYEGTSEIQRIVIANAVLRE 411
            .||.:|.|||:|:.|::||.::|.|
Zfish   393 IRVHQILEGTNEVMRMIIARSLLTE 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 CaiA 37..414 CDD:224871 139/377 (37%)
SCAD_SBCAD 39..410 CDD:173847 136/372 (37%)
acad8NP_957449.1 CaiA 42..415 CDD:224871 137/374 (37%)
IBD 43..417 CDD:173851 138/375 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.