DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and ivd

DIOPT Version :9

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_958899.1 Gene:ivd / 368775 ZFINID:ZDB-GENE-030616-262 Length:418 Species:Danio rerio


Alignment Length:416 Identity:159/416 - (38%)
Similarity:237/416 - (56%) Gaps:7/416 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQQLIRVARTLGQRSSGAWSARIIAGGNRGIACLAALSETHQILQKTCREFANAELAPKARHHDR 65
            :::.:||.:.:.:.|:|. |.|..||.......:..|:|....|::|.:.|...:|||.|...|:
Zfish     4 VRRALRVCQGVVKVSAGV-SRRGCAGAVPVDDIVNGLTEEQIQLRQTVQRFFQEKLAPYADEIDK 67

  Fly    66 EELYP--AEQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSIVMGV-NNLYLG 127
            :..:|  .|..:.:|:|||:.||...|:||:||.|..:.|.|||::|..||:.:..|. :||.:.
Zfish    68 KNEFPQMREFWKEMGDLGLLGVTAPVEFGGTGLGYLDHVIIMEEISRVSAAIGLSYGAHSNLCVN 132

  Fly   128 AVQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSK 192
            .:.:||.::||:.::.....|||:...|:||..:|||..:...|||.|||.|.:||.|.||:|..
Zfish   133 QMVRHGNQKQKEKYMPKLLTGEHVGALAMSESNSGSDVVSMKLTAKKQGDHYVLNGNKFWITNGS 197

  Fly   193 EASGGIVFATVDKSMKHKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLG 257
            :|...||:|..|.....:|||||:..|.:||.|.|:|..|:|||.:|||:||.||..:|...|||
Zfish   198 DADVLIVYAKTDPEAVARGITAFIVEKGMPGFSSAQKLDKLGMRGSSTCELVFEDCKIPEENVLG 262

  Fly   258 AAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATR 322
            ....|..:.|..||..|:.:|:...||.||.|:.|:.|...|.|||:.:...||:|.|:|||.||
Zfish   263 PLNKGVYVLMSGLDLERLVLASGPVGIMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKMADMYTR 327

  Fly   323 VEISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRNA 387
            :...|...:..|...|.|....|:.|...|:.:|:||..|...||.|||.||..|.|...:.|:|
Zfish   328 LSSCRQYLYNVARACDKGHFSAKDCAGVILYCAENATQVALDGIQCLGGNGYINDYPMGRFLRDA 392

  Fly   388 RVTEIYEGTSEIQRIVI---ANAVLR 410
            ::.||..|||||:||:|   :||:.:
Zfish   393 KLYEIGAGTSEIRRIIIGRSSNAMFK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 CaiA 37..414 CDD:224871 151/380 (40%)
SCAD_SBCAD 39..410 CDD:173847 150/376 (40%)
ivdNP_958899.1 IVD 38..415 CDD:173845 149/376 (40%)
PLN02519 39..411 CDD:215284 149/371 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 1 1.000 - - FOG0000508
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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