DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and Acox3

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_001137800.1 Gene:Acox3 / 33898 FlyBaseID:FBgn0031813 Length:724 Species:Drosophila melanogaster


Alignment Length:424 Identity:89/424 - (20%)
Similarity:165/424 - (38%) Gaps:97/424 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 RHHD--REELYPAEQVRRLGELGLMSVTVREEYGGS---GLDYQAYAIGMEEVARGDAAVSIVMG 120
            :|.|  ||.....|:.|.:.......:..::.||.:   |..:...|.| :.:...|.:.|:..|
  Fly    90 QHPDYQREPGSDLERTREMANKRQHLLWEQQFYGVNEYLGTPHLLLAFG-QAIFSYDFSTSVKFG 153

  Fly   121 VN-NLYLGAVQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQI--- 181
            :: .::...:..:|:.:..: ::........:..|||:|..:|::|....|.|     :|.:   
  Fly   154 LSTGMFPSTLVSNGSGRLGK-YVAKIADNRILGAYALTEISHGTNALGMRTRA-----TYDVKRQ 212

  Fly   182 ---------NGTKAWISN-SKEASGGIVFATV---DKSMKHKGITAFLTP-KD------VPGLSI 226
                     ...|.|:.| .|..:..||:|.:   |.  ||:|:.|||.| :|      .||:::
  Fly   213 EFIIHTPDFEAAKCWVGNLGKTCTHAIVYAQLYVPDD--KHQGLQAFLVPIRDERTLLPFPGVTV 275

  Fly   227 AKKESKMGMRATSTCQLVLEDVHVPRSRVLGAAGD-------GFKI---------AMQSLDCGRI 275
            .....|:|:.......::.....:|::.:|...||       ..||         ::.:|..||:
  Fly   276 GDMGEKIGLNGIDNGFVMFNQYRIPKANLLSKTGDIDAQGNYTSKIKDERKRLGASLGALSVGRV 340

  Fly   276 GIAAQATGIAQAALELAVDYSQKRVAFG--KHLARLQLIQQK------LADMATRVEISRLLTWR 332
            .|.|........|:.:|..|:..|..||  ...|...:|:.:      :..:||.:.: |:.|  
  Fly   341 NITAITYVALSKAVTIATRYAASRRQFGPTNSPAEWPVIEYQSQQYRLIPHLATTIAL-RVAT-- 402

  Fly   333 AAWLKDNGLPI---------TKEAAMAKLHASES-----ATFCA----HQCIQILGGMGY----- 374
             .|:....:.:         |.:|.| ::||..|     ||:.|    .:|.:..||.||     
  Fly   403 -LWIGKENVDLTMKGFTGEDTSQAGM-EIHAISSALKPVATWAARDGIQECREACGGHGYLKSSG 465

  Fly   375 ----TTDLPAELYYRNARVTEIYEGTS---EIQR 401
                ..|..|...|.....|.|.:.::   .:||
  Fly   466 LGELRNDNDANCTYEGENNTLIQQASNWLISLQR 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 89/424 (21%)
Acox3NP_001137800.1 ACAD 52..694 CDD:447864 89/424 (21%)

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