DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4860 and CG4586

DIOPT Version :9

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_572371.1 Gene:CG4586 / 31641 FlyBaseID:FBgn0029924 Length:677 Species:Drosophila melanogaster


Alignment Length:508 Identity:107/508 - (21%)
Similarity:174/508 - (34%) Gaps:161/508 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RVARTLGQRSSGAWSARIIAGGNRGI----------------------ACLAALSETHQILQKTC 48
            |.|.||.......|    .|||:..:                      :||:......|.:.::.
  Fly    11 RAAATLDSEDFARW----WAGGSGQLEERRALERRFYEDPDFAEPVHPSCLSYKERYEQTVARST 71

  Fly    49 REFANAELAPKARHHDREELYPAEQVRRLGELGLMSVTVREEYG-------GSGLDYQAYAIGME 106
            |..|      |.|...||: .|..|         :||.:..::.       |:||..|::.:.:.
  Fly    72 RFLA------KLRQWQREK-QPQLQ---------LSVNMLRDFRLLLSGSLGTGLFQQSFPLRVH 120

  Fly   107 EVARGDAAVSIVMGVNNLYLGAVQQHGTEQQKQDFLVPYTQGEH----IAFYALSEPGNGSDAGA 167
                           .::::..:...|||:|:..:|   .:..|    :..||.:|.|:|:....
  Fly   121 ---------------FSMFMTTLLSQGTEEQQAQWL---NRSWHMDGVLGTYAQTELGHGTFVRG 167

  Fly   168 ASTTAKLQGDSYQINGTKAWISNSKEAS------GG--------IVFATVDKSMKHKGITAFL-- 216
            ..|.|    |...|  |:.:|.|:...|      ||        ||.|.:....||.|:.:|:  
  Fly   168 LETRA----DYDPI--TQEFILNTPTQSSYKWWPGGLGNTANVAIVLAQLYVKGKHYGLQSFVVR 226

  Fly   217 -----TPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLD----C 272
                 |.:.:.|:.:.....::|....:...|.|.||.:||:::|      .|.|....|    .
  Fly   227 IRDERTHEPLTGVDVGDIGPRLGGNGVNNGFLGLRDVRIPRNQML------MKNAQVLTDGTFVQ 285

  Fly   273 GRIGIAAQAT--------------GIAQAALELAVDYS-----------QKRVAFGKHLARLQLI 312
            ||..:....|              |:.||| .:|..||           |..|:...|:.:    
  Fly   286 GRPPLLLYGTMVYVRVITVKDVLFGLLQAA-TIATRYSVVRRQSRINSDQPEVSVLDHITQ---- 345

  Fly   313 QQKLADMATRVEISRLLT---WR-----AAWLKD------NGLPITKE-----AAMAKLHASESA 358
            |.|:.....|....||::   ||     ...|:|      |.||....     .|:|...|||..
  Fly   346 QAKILPQIARGVSYRLVSDWLWRFYEDVLRQLEDESTKGRNSLPELHALSCCLKAVATDEASEGV 410

  Fly   359 TFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLRE 411
            ......|    ||.|:.:....:..|.....|..|||...:..:..|..::|:
  Fly   411 DLLRKSC----GGHGFLSSANFDSIYGLTAATYTYEGEYTVLLLQTARFLVRQ 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 CaiA 37..414 CDD:224871 97/455 (21%)
SCAD_SBCAD 39..410 CDD:173847 96/450 (21%)
CG4586NP_572371.1 ACAD 6..653 CDD:299127 107/508 (21%)
PLN02443 7..677 CDD:178062 107/508 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460774
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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