DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and Acad9

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_861433.2 Gene:Acad9 / 294973 RGDID:727973 Length:625 Species:Rattus norvegicus


Alignment Length:391 Identity:143/391 - (36%)
Similarity:219/391 - (56%) Gaps:21/391 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LSETHQI---LQKTCREFANAELAPKARHHDREELYPAEQVRRLGELGLMSVTVREEYGGSGLDY 98
            |||.:|.   |:|    |.|.|:  .:|..|:|...||:.:.:|..|||..:.|.|||||.||..
  Rat    68 LSEINQFVGPLEK----FFNEEV--DSRKIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSN 126

  Fly    99 QAYAIGMEEVARGDAAVSIVMGVNN-LYLGAVQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNG 162
            ..|| .:.|:...||::::.:..:. :.|..:...|.|:||..:|...:.|||||.:.|:||.:|
  Rat   127 TMYA-RLGEIISMDASITVTLAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASG 190

  Fly   163 SDAGAASTTAKLQGDS--YQINGTKAWISNSKEASGGIVFATV-----DKSMKHKGITAFLTPKD 220
            |||.:..|.|.|..|.  :.:||:|.||:|...|:...|||..     |.|:|.| :|||:..:|
  Rat   191 SDAASIQTRATLSEDKKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIKDK-MTAFIVERD 254

  Fly   221 VPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATGIA 285
            ..|::..|.|.|:|:|.::||::..|:..||...|||..|.|||:||..|:.||..:.:...|:.
  Rat   255 FGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAGML 319

  Fly   286 QAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDN-GLP-ITKEAA 348
            :..:|...:|:..|..|.::|:...|||:|.|.||.:..:...:.:..:.:.|. |.| .:.|||
  Rat   320 KKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPDCSIEAA 384

  Fly   349 MAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLRELG 413
            |.|:.:||:|..|..:.:|||||.||..|.|.|...|:||:..|:|||:||.|:.||...|:..|
  Rat   385 MVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIALTGLQHAG 449

  Fly   414 K 414
            :
  Rat   450 R 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 139/383 (36%)
Acad9NP_861433.2 VLCAD 42..449 CDD:173850 142/388 (37%)

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