DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and Acadvl

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_037023.1 Gene:Acadvl / 25363 RGDID:2014 Length:655 Species:Rattus norvegicus


Alignment Length:392 Identity:128/392 - (32%)
Similarity:202/392 - (51%) Gaps:20/392 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ILQKTCREFANAELAPKAR---------HHDREELYPAEQVRRLGELGLMSVTVREEYGGSGLDY 98
            :|.:...:|....:.|.||         .:|..|....:.::.|.|||...:.|..|.||.||..
  Rat    93 VLNEGQTQFLKELVGPVARFFEEVNDPAKNDSLEKVEEDTLQGLKELGAFGLQVPSELGGLGLSN 157

  Fly    99 QAYAIGMEEVARGDAAVSIVMGVN-NLYLGAVQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNG 162
            ..||...|.|...|..||:.:|.: ::....:..:||:.||:.:|.....|:.:|.:.|:||.:|
  Rat   158 TQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQKEKYLPRVASGQALAAFCLTEPSSG 222

  Fly   163 SDAGAASTTAKLQ--GDSYQINGTKAWISNSKEASGGIVFA------TVDKSMKHKGITAFLTPK 219
            ||..:..::|...  |..|.:||:|.||||...|....|||      ....::|.| ||||:..:
  Rat   223 SDVASIRSSAVPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPIKDAATGAVKEK-ITAFVVER 286

  Fly   220 DVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATGI 284
            ...|::....|.|||::|::|.::..:.|.||...|||..|||||:|:..|:.||.|:||...|.
  Rat   287 SFGGVTHGLPEKKMGIKASNTSEVYFDGVKVPAENVLGEVGDGFKVAVNILNNGRFGMAATLAGT 351

  Fly   285 AQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDNGL-PITKEAA 348
            .:|.:..|||::..|..||..:....:||:|||.||....::..:.:..:...|.|. ....|||
  Rat   352 MKAIIAKAVDHATNRTQFGDKIHNFGVIQEKLARMAILQYVTESMAYMLSANMDQGFKDFQIEAA 416

  Fly   349 MAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLRELG 413
            ::|:..||:|.....:||||:||||:..:...|...|:.|:..|:|||::|.|:.:|.....:.|
  Rat   417 ISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDIRIFRIFEGTNDILRLFVALQGCMDKG 481

  Fly   414 KE 415
            ||
  Rat   482 KE 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 125/385 (32%)
AcadvlNP_037023.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70
Catalytic. /evidence=ECO:0000250|UniProtKB:P49748 41..482 125/389 (32%)
VLCAD 72..481 CDD:173850 125/388 (32%)
Membrane-anchoring. /evidence=ECO:0000250|UniProtKB:P49748 483..516 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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