DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and acdh-10

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_001294824.1 Gene:acdh-10 / 24104866 WormBaseID:WBGene00020366 Length:417 Species:Caenorhabditis elegans


Alignment Length:413 Identity:154/413 - (37%)
Similarity:233/413 - (56%) Gaps:15/413 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIRVART---LGQRSSGAWSARIIAGGNRGIACLAALSETHQILQKTCREFANAELAPKARHHDR 65
            |.|:|.:   |.:.::|     :||..:|.|:  ..||||.:.:|....:|:...|.|.|...|.
 Worm     2 LSRIATSSLGLSRSATG-----VIATQSRQIS--FDLSETQKEIQDAALKFSKDVLVPNAAKFDE 59

  Fly    66 EELYPAEQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSI-VMGVNNLYLGAV 129
            ...:|.|.||:...||||:..:.|:|||.|:.....|:.:|.::.|...:.: :|| .:|.:..|
 Worm    60 SGEFPWEIVRQAHSLGLMNPQIPEKYGGPGMTTLETALIVEALSYGCTGIQLGIMG-PSLAIAPV 123

  Fly   130 QQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSKEA 194
            ...|.|:||:.:|........||.|.::|||.|||.....|..:.:||.|.|||:||||:....|
 Worm   124 YISGNEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWITGGGHA 188

  Fly   195 SGGIVFATVD---KSMKHKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVL 256
            ....|.|..|   |:...|..|||:...|.||::..|||..||.|.:.|..:..|||.||...||
 Worm   189 KWFFVLARSDPNPKTPAGKAFTAFIVDGDTPGITRGKKEKNMGQRCSDTRVITFEDVRVPAENVL 253

  Fly   257 GAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMAT 321
            ||.|.|||:||::.|..|.|:||.|.|::...|:.:..|:.:|.|||..:|..|.:|..|||||.
 Worm   254 GAPGAGFKVAMEAFDMTRPGVAAGALGLSWRCLDESAKYALERKAFGTVIANHQAVQFMLADMAV 318

  Fly   322 RVEISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRN 386
            .:|::||:|:::|...||.:..:..|::||..|:::|...|...:||.||.|:.::.|.|...|:
 Worm   319 NLELARLITYKSANDVDNKVRSSYNASIAKCFAADTANQAATNAVQIFGGNGFNSEYPVEKLMRD 383

  Fly   387 ARVTEIYEGTSEIQRIVIANAVL 409
            |::.:||||||:||||||:..:|
 Worm   384 AKIYQIYEGTSQIQRIVISRMLL 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 143/375 (38%)
acdh-10NP_001294824.1 MCAD 31..408 CDD:173846 145/377 (38%)

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