DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and acdh-10

DIOPT Version :9

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_001294824.1 Gene:acdh-10 / 24104866 WormBaseID:WBGene00020366 Length:417 Species:Caenorhabditis elegans


Alignment Length:413 Identity:154/413 - (37%)
Similarity:233/413 - (56%) Gaps:15/413 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIRVART---LGQRSSGAWSARIIAGGNRGIACLAALSETHQILQKTCREFANAELAPKARHHDR 65
            |.|:|.:   |.:.::|     :||..:|.|:  ..||||.:.:|....:|:...|.|.|...|.
 Worm     2 LSRIATSSLGLSRSATG-----VIATQSRQIS--FDLSETQKEIQDAALKFSKDVLVPNAAKFDE 59

  Fly    66 EELYPAEQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSI-VMGVNNLYLGAV 129
            ...:|.|.||:...||||:..:.|:|||.|:.....|:.:|.::.|...:.: :|| .:|.:..|
 Worm    60 SGEFPWEIVRQAHSLGLMNPQIPEKYGGPGMTTLETALIVEALSYGCTGIQLGIMG-PSLAIAPV 123

  Fly   130 QQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSKEA 194
            ...|.|:||:.:|........||.|.::|||.|||.....|..:.:||.|.|||:||||:....|
 Worm   124 YISGNEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWITGGGHA 188

  Fly   195 SGGIVFATVD---KSMKHKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVL 256
            ....|.|..|   |:...|..|||:...|.||::..|||..||.|.:.|..:..|||.||...||
 Worm   189 KWFFVLARSDPNPKTPAGKAFTAFIVDGDTPGITRGKKEKNMGQRCSDTRVITFEDVRVPAENVL 253

  Fly   257 GAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMAT 321
            ||.|.|||:||::.|..|.|:||.|.|::...|:.:..|:.:|.|||..:|..|.:|..|||||.
 Worm   254 GAPGAGFKVAMEAFDMTRPGVAAGALGLSWRCLDESAKYALERKAFGTVIANHQAVQFMLADMAV 318

  Fly   322 RVEISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRN 386
            .:|::||:|:::|...||.:..:..|::||..|:::|...|...:||.||.|:.::.|.|...|:
 Worm   319 NLELARLITYKSANDVDNKVRSSYNASIAKCFAADTANQAATNAVQIFGGNGFNSEYPVEKLMRD 383

  Fly   387 ARVTEIYEGTSEIQRIVIANAVL 409
            |::.:||||||:||||||:..:|
 Worm   384 AKIYQIYEGTSQIQRIVISRMLL 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 CaiA 37..414 CDD:224871 145/377 (38%)
SCAD_SBCAD 39..410 CDD:173847 143/375 (38%)
acdh-10NP_001294824.1 CaiA 27..411 CDD:224871 146/383 (38%)
ACAD 31..408 CDD:299127 145/377 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163677
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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