DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and acox-1.3

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_493263.1 Gene:acox-1.3 / 184167 WormBaseID:WBGene00008566 Length:660 Species:Caenorhabditis elegans


Alignment Length:458 Identity:92/458 - (20%)
Similarity:158/458 - (34%) Gaps:136/458 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 HDREELYP-----AEQVRRLGELG----LMSVTVREEYGGS-----------------------G 95
            :.|||:..     .|.:.|:.||.    |:.:|..|:...|                       .
 Worm    31 YGREEIASRRRQLTESISRIHELAESKPLVFMTREEKIAESCRKLEVLSRHWNQTPFNRDNEEDA 95

  Fly    96 LDYQAYAIGME--EVARGDAAVSIVMGVNNLYLGAVQQHGTEQQKQDFLVPYTQGEHIAFYALSE 158
            |......:|||  .:|..|          .:::..:....:::|::.:|....:.|.|..||.:|
 Worm    96 LHIYREVLGMEGHPLALHD----------TMFIPTLVAQASQEQQEKWLGRARRKEIIGCYAQTE 150

  Fly   159 PGNGSDAGAASTTAKLQGDSYQ-------INGTKAWI-SNSKEASGGIVFATVDKSMKHKGITAF 215
            .|:|::.....|||....|:.:       |...|.|. :..|.::..||.|.:....::.|...|
 Worm   151 MGHGTNLRKLETTATYSPDTQEFILNTPTITALKWWPGALGKSSNNAIVVANLLIKDQNYGPHPF 215

  Fly   216 L-------TPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVL------GAAG-----DG 262
            :       |...:.|:.:.....||.........|...:..:||:.:|      .|.|     ..
 Worm   216 MVQLRDEKTHIPLKGIVVGDIGPKMAFNGADNGYLGFNNHRIPRTNLLMRHTKVEANGTYIKPSH 280

  Fly   263 FKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQ-KRVAFGKHLARLQLIQQKLADMATRVEIS 326
            .||...|:...|..:|........:||.:||.||. :|..|      |:...||:..:..:.:..
 Worm   281 AKIGYSSMVKVRSRMAMDQGLFLASALVIAVRYSAVRRQGF------LEDKTQKVKVLDYQTQQH 339

  Fly   327 RLLTWRA-----------------AWLKDNGLPITKEAAMAKLHASESA--TFCAHQ-------- 364
            ||....|                 ..|||  :.:...:.||.|||..|.  :...||        
 Worm   340 RLFPSLARAYAFIFTGFETIHLYSQLLKD--VDMGNTSGMADLHALTSGLKSVVTHQTGEGIEQA 402

  Fly   365 ---CIQILGGMGYTTDLPAELYYRNARVTEI---------YEGTS-----EIQRIVIANAVLREL 412
               |    |..||:         ..:.::||         |||.:     ::.|.::.:..|.:.
 Worm   403 RMAC----GEHGYS---------MASYISEIYGVAIGGCTYEGENMVMLLQLARYLVKSVELIKS 454

  Fly   413 GKE 415
            |:|
 Worm   455 GEE 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 89/451 (20%)
acox-1.3NP_493263.1 ACAD 11..634 CDD:447864 92/458 (20%)

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