DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and acox-1.6

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_510603.2 Gene:acox-1.6 / 181668 WormBaseID:WBGene00010336 Length:667 Species:Caenorhabditis elegans


Alignment Length:372 Identity:82/372 - (22%)
Similarity:147/372 - (39%) Gaps:65/372 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 EYGGSGLDYQAYAIGMEEVARGDAAVSIVMGVNNLYLGAVQQHGTEQQKQDFLVPYTQGEHIAFY 154
            ::.|.|:.|||..:|.:..|   .::..||     ::..:|....:.|..::|........:..|
 Worm    90 DFFGEGMYYQALTMGRDLHA---MSLHYVM-----FIPTLQGQTDDDQLDEWLTKAISRAVVGTY 146

  Fly   155 ALSEPGNGSDAGAASTTA-------KLQGDSYQINGTKAWISN-SKEASGGIVFATVDKSMKHKG 211
            |.:|.|:|::.....|||       :...:|..|...|.|... .|.::..:|.|.:....:.||
 Worm   147 AQTELGHGTNLSKLETTATYDPATEEFVMNSPTITAAKWWPGGLGKSSNYAVVVAQLYTKGECKG 211

  Fly   212 ITAFL-------TPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVL----GAAGDGFKI 265
            ...|:       |...:.|:.:.....|:|:.......|:.:.|.:||..:|    ....||..|
 Worm   212 PHPFIVQLRDEDTHYPLKGIRLGDIGPKLGINGNDNGFLLFDKVRIPRKALLMRYAKVNPDGTYI 276

  Fly   266 AMQSLDCG--------RIGIAAQATGIAQAALELAVDYS----QKRVAFGKHLARLQLIQQKLAD 318
            |......|        .|.|..|:|.:| ||..:|..|:    |..:..||  ..:|:|..:...
 Worm   277 APAHSKLGYGTMVFVRSIMIKDQSTQLA-AAATIATRYAAVRRQGEITPGK--GEVQIIDYQTQQ 338

  Fly   319 MATRVEISRLLTWRAA--WLKDNGLPITKEAA------MAKLHASESATFC---------AHQCI 366
            .....:::|...:.||  .::|..:.:|::..      :|:||...|....         ..||.
 Worm   339 FRVFPQLARAFAFMAAATEIRDLYMTVTEQLTHGNTELLAELHVLSSGLKSLVSWDTAQGIEQCR 403

  Fly   367 QILGGMGYT--TDLPAELY-YRNARVTEIYEGTSEIQRIVIANAVLR 410
            ...||.||:  :..| |:| |.....|  |||.:.:..:.:|..:::
 Worm   404 LACGGHGYSQASGFP-EIYGYAVGGCT--YEGENIVMLLQVARFLMK 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 82/370 (22%)
acox-1.6NP_510603.2 ACAD 12..639 CDD:447864 82/372 (22%)

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