DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and ivd-1

DIOPT Version :9

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_500720.1 Gene:ivd-1 / 177281 WormBaseID:WBGene00015326 Length:419 Species:Caenorhabditis elegans


Alignment Length:406 Identity:145/406 - (35%)
Similarity:229/406 - (56%) Gaps:21/406 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 AGGNRGIACLA--------------ALSETHQILQKTCREFANAELAPKARHHDREELYPAEQVR 75
            |.|.|.:...|              .|::....|:::.|:||:.||||.|...|::..:  :|:|
 Worm    13 AAGGRALQSQAVRQFSAYPIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGW--DQLR 75

  Fly    76 ----RLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSIVMGV-NNLYLGAVQQHGTE 135
                :||:.||:.:|...||||||::|.::.|.|||::|....:::..|. :||.:..:.::|:|
 Worm    76 PFWKKLGDQGLLGITAPAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSE 140

  Fly   136 QQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSKEASGGIVF 200
            :|::.:|.....|||:...|:||...|||..:....|:.:||.|.:||||.||:|..:|...:|:
 Worm   141 EQRKKYLPKLISGEHMGALAMSEAQAGSDVVSMKLRAEKKGDKYVLNGTKFWITNGPDADVLVVY 205

  Fly   201 ATVDKSMKHKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLGAAGDGFKI 265
            |..|.|....|||.||..|:.||.|.:.|..|:|||.::||:||.::..:..|:::|..|.|..:
 Worm   206 AKTDPSKHQHGITCFLVEKNTPGFSQSPKLDKLGMRGSNTCELVFDNCEIHESQIMGGKGKGVYV 270

  Fly   266 AMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLT 330
            .|..||..|:.::....|:.|||.::|.||:.:|.|||:.:...||:|.|||||.|.:..||...
 Worm   271 LMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLNASRSYL 335

  Fly   331 WRAAWLKDNGLPITKEAAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEG 395
            :..|...|.|....|:.|...|:.:|..|......||||||.||..|.||....|:|::.||..|
 Worm   336 YMVAKAADKGNVSNKDCAGVILYVAEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAG 400

  Fly   396 TSEIQRIVIANAVLRE 411
            |||::|::|..|:.:|
 Worm   401 TSEVRRLIIGRALNKE 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 CaiA 37..414 CDD:224871 141/380 (37%)
SCAD_SBCAD 39..410 CDD:173847 139/375 (37%)
ivd-1NP_500720.1 IVD 38..415 CDD:173845 140/378 (37%)
PLN02519 39..416 CDD:215284 140/378 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 1 1.000 - - FOG0000508
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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