DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and acdh-8

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_495142.1 Gene:acdh-8 / 173979 WormBaseID:WBGene00019406 Length:412 Species:Caenorhabditis elegans


Alignment Length:408 Identity:151/408 - (37%)
Similarity:224/408 - (54%) Gaps:8/408 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LGQRSSG-AWSARIIAGGNRGIACLAALSETHQILQKTCREFANAELAPKARHHDREELYPAEQV 74
            |.:.||| .|:.  ||..:|.::  ..||:|.:.:|....:|:...|.|.|...|:...:|.|.|
 Worm     2 LTRLSSGTTWNR--IAVQSRQMS--FELSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIV 62

  Fly    75 RRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSIVMGVNNLYLGAVQQHGTEQQKQ 139
            ::...||.|:..:.|:|||.||.....|:.:|.::.|.:.:.|.:...:|....:...|||:||:
 Worm    63 KQAHSLGFMNTIIPEKYGGPGLSNLDTALIVEALSYGCSGLQIAIFGPSLAAAPICLSGTEEQKK 127

  Fly   140 DFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSKEASGGIVFATVD 204
            .:|........||.|.::|||.|||.....|.|..|||.|.|||:||||:....|....|.|..|
 Worm   128 KYLGMLAAEPIIASYCVTEPGAGSDVNGVKTKAVKQGDEYIINGSKAWITGGGHAKWFFVLARTD 192

  Fly   205 ---KSMKHKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLGAAGDGFKIA 266
               |:...|..|||:...|.||::..|||:.||.|.:.|..:..|||.||:..:|||.|.|||:|
 Worm   193 DNPKTPAGKAFTAFIVDGDTPGITRGKKENNMGQRCSDTRSITFEDVRVPKENILGAPGAGFKVA 257

  Fly   267 MQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTW 331
            |.:.|..|..:||.|.|:|...|:.:..|:.:|.|||..:|..|.:|..:||||..:|:|||.|:
 Worm   258 MGAFDLTRPQVAASAVGLAWRCLDESTKYAMERHAFGTPIANHQGVQFMIADMAINLELSRLFTY 322

  Fly   332 RAAWLKDNGLPITKEAAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGT 396
            |||...|:....:..|::||..|:::|...|....||.||.|:..:.|.|...|:|::.:|||||
 Worm   323 RAAAEVDSYGVSSYNASIAKCFAADTANVAATNACQIFGGAGFNCEYPVEKLMRDAKIYQIYEGT 387

  Fly   397 SEIQRIVIANAVLRELGK 414
            |:|||:||...:.:...|
 Worm   388 SQIQRMVIGRTLFQNFAK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 140/373 (38%)
acdh-8NP_495142.1 ACAD 25..400 CDD:447864 142/374 (38%)

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