DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and acdh-9

DIOPT Version :9

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_493832.1 Gene:acdh-9 / 173466 WormBaseID:WBGene00017874 Length:409 Species:Caenorhabditis elegans


Alignment Length:411 Identity:139/411 - (33%)
Similarity:221/411 - (53%) Gaps:16/411 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIR--VARTLGQRSSGAWSARIIAGGNRGIACLAALSETHQILQKTCREFANAELAPKARHHDRE 66
            |:|  :::.|..|:|.::..|...|..|.:.  ..|...||        ||..|:.||....|::
 Worm     2 LLRNVLSKGLRLRNSSSYCLRPGVGLERDVE--DVLEAAHQ--------FAKKEMYPKMADWDKQ 56

  Fly    67 ELYPAEQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSIVMGVNNLYLGAVQQ 131
            ...|.:.:|:.||:|..::....::|||||.....::..|:::.|..:.:..:.::|:....:..
 Worm    57 GELPMDVLRKAGEMGFGAIYCSGDHGGSGLSRLHASVIFEQLSMGCVSTAAYISIHNMCAWMLDT 121

  Fly   132 HGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSKEASG 196
            :|.|:.|:|.|......:.:..|.|:||..||||.:..|||..:||.|.:||:||:||.:..::.
 Worm   122 YGPEKLKEDLLPDMAVFKKLGSYCLTEPDAGSDAASIRTTATKKGDYYVVNGSKAFISGAGTSNN 186

  Fly   197 GIVFATVDKSMK-HKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLGAAG 260
            ..|....|.:.. .|||...:......|.|..|||.|:|..:..|..|..||..||.:..:|..|
 Worm   187 YFVMMRQDGAAPGAKGIFCLMIEDGTEGFSYGKKEDKLGWNSQPTRILTFEDCKVPITNQIGKDG 251

  Fly   261 DGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATRVEI 325
            .||.|||..|:.|||.||:.:.|.||.:::||:::.:.|..|||.||..|..|.|||::||::..
 Worm   252 FGFNIAMAGLNGGRINIASCSLGAAQRSMDLAIEHLKYRKQFGKSLADFQYNQFKLAELATKLYT 316

  Fly   326 SRLLTWRAAWLKDNGLPITKEA--AMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRNAR 388
            |||:...||...||..| .|.|  |||||||:::.....:..:|:.||.|:..|.|.:.|.|:.|
 Worm   317 SRLIVRNAAEQLDNDDP-EKVALCAMAKLHATDNCFDVVNGALQMFGGYGFLKDYPVQQYLRDIR 380

  Fly   389 VTEIYEGTSEIQRIVIANAVL 409
            |.:|.|||:|:.|::|:..:|
 Worm   381 VHQILEGTNEMMRLLISRDLL 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 CaiA 37..414 CDD:224871 131/376 (35%)
SCAD_SBCAD 39..410 CDD:173847 130/374 (35%)
acdh-9NP_493832.1 CaiA 26..401 CDD:224871 132/385 (34%)
IBD 27..403 CDD:173851 132/386 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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