DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and acdh-5

DIOPT Version :9

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_491942.1 Gene:acdh-5 / 172400 WormBaseID:WBGene00016491 Length:442 Species:Caenorhabditis elegans


Alignment Length:377 Identity:119/377 - (31%)
Similarity:186/377 - (49%) Gaps:6/377 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ETHQILQKTCREFANAELAPKARHHDREELYPAEQV-RRLGELGLMSVTVREEYGGSGLDY---Q 99
            |||.::||:..:....::.|.....:::..|||..| :.||:.|:..|...|.:||:|.|.   .
 Worm    61 ETHFVMQKSLGKLIEEKINPNVAKWEQDGRYPAHLVFKMLGDHGVFGVNKPEAFGGTGTDIAMAT 125

  Fly   100 AYAIGMEEVARGDAAVSIVMGVNNLYLGAVQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSD 164
            |.|..|..:..|...:| ||...::...|:.|.|::..::.||.|...|:.::..|:|||..|||
 Worm   126 AIAEQMGAINCGSIPMS-VMVQTDMSTPALAQFGSDALRERFLRPSITGDLVSSLAVSEPHAGSD 189

  Fly   165 AGAASTTAKLQGDSYQINGTKAWISNSKEASGGIVFA-TVDKSMKHKGITAFLTPKDVPGLSIAK 228
            ..|..|.|:.||....|||:|.||:|..:|....|.. |.:.|..||..:....|.|..|:..:.
 Worm   190 VSAVHTHARRQGSDLIINGSKMWITNGGQADWACVLVNTSNTSNVHKNKSLVCVPLDAVGVHRST 254

  Fly   229 KESKMGMRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAV 293
            ...|:|||::.|.||..|||.||.|.::|..|.||...|:..:..|:...|......|..::..:
 Worm   255 PLDKLGMRSSDTVQLFFEDVRVPSSYIIGEEGRGFGYQMKQFNDERLVTVAVGLLPLQKCIDETI 319

  Fly   294 DYSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDNGLPITKEAAMAKLHASESA 358
            :|::.|:.|||.|...|.||.:||::...:|.:|.|.:|....:..|..::...|||||.....|
 Worm   320 EYARDRLLFGKTLLDQQYIQFQLAELEAELEATRALLYRTVLARSRGDDVSMLTAMAKLKIGRLA 384

  Fly   359 TFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLR 410
            .....||:|:.||.||..:......:|:.|:..|..|..|:...:|..|..|
 Worm   385 RAITDQCLQVWGGAGYLNENGISRAFRDFRLFSIGAGCDEVMMRIIHKAQSR 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 CaiA 37..414 CDD:224871 119/377 (32%)
SCAD_SBCAD 39..410 CDD:173847 118/375 (31%)
acdh-5NP_491942.1 CaiA 57..441 CDD:224871 119/377 (32%)
Acyl-CoA_dh_N 60..174 CDD:280866 32/113 (28%)
ACAD 149..430 CDD:173838 90/280 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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