DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and acdh-1

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_001370604.1 Gene:acdh-1 / 172358 WormBaseID:WBGene00016943 Length:427 Species:Caenorhabditis elegans


Alignment Length:376 Identity:159/376 - (42%)
Similarity:232/376 - (61%) Gaps:2/376 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LSETHQILQKTCREFANAELAPKARHHDREELYPAEQVRRLGELGLMSVTVREEYGGSGLDYQAY 101
            |:|.......|.|:|:...:.|..|..|:.........:.:.|.|||.|.|.|||||||..:...
 Worm    48 LTENELFFADTVRKFSKDVVKPLVREMDKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGSSFFNA 112

  Fly   102 AIGMEEVARGDAAVSIVMGVNN-LYLGAVQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDA 165
            .|.:||:|:.|.:||.::|::| |.:..:..:|||:||..:| |....:.:|.:.:||.|.||||
 Worm   113 MIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKYL-PRLCSDSLASFCISESGAGSDA 176

  Fly   166 GAASTTAKLQGDSYQINGTKAWISNSKEASGGIVFATVDKSMKHKGITAFLTPKDVPGLSIAKKE 230
            .|..|.||..||.:.|:|||.||:||.||...:|||..|.|.|:||||.|:..:...||::.|:|
 Worm   177 FALKTIAKRDGDHFLISGTKMWITNSGEAQVFVVFANADPSQKYKGITCFIVERSADGLTVDKEE 241

  Fly   231 SKMGMRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDY 295
            .|:|:||:||||:..::|.|.:|.:||..|.|:|.|::.|:.|||.|.||..|:||...:..:.|
 Worm   242 DKLGIRASSTCQVHFDNVRVHKSAILGEYGKGYKYAIECLNAGRIAIGAQMIGLAQGCFDQTIPY 306

  Fly   296 SQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATF 360
            .|:|..||:.|...|.:|.::|...|.:|.:|||.:.||.:|:.|:|..:|||||||.||:.||.
 Worm   307 LQQREQFGQRLIDFQGLQHQIAQARTEIEAARLLVYNAARMKEYGIPYVREAAMAKLFASQVATS 371

  Fly   361 CAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLRE 411
            .:.||::.|||:|:|.:.|||.:||:|.:.|||||||.||...||..:..|
 Worm   372 TSAQCVKWLGGVGFTKEFPAEKFYRDAMIGEIYEGTSNIQLNTIAKLIDNE 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 157/371 (42%)
acdh-1NP_001370604.1 SCAD_SBCAD 50..420 CDD:173847 157/370 (42%)

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