DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and Arc42

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:XP_321112.6 Gene:Arc42 / 1281174 VectorBaseID:AGAMI1_013418 Length:404 Species:Anopheles gambiae


Alignment Length:413 Identity:258/413 - (62%)
Similarity:323/413 - (78%) Gaps:12/413 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQQLIRVARTLGQRSSGAWSARIIAGGNRGIACLAALSETHQILQKTCREFANAELAPKARHHDR 65
            |...:|:|..:|||..           :|.||.|:||.:|||:||||||:||:.||.|.|...||
Mosquito     1 MMFAVRIASRMGQRVR-----------SRSIASLSALPDTHQMLQKTCRDFADNELVPNAARFDR 54

  Fly    66 EELYPAEQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSIVMGVNN-LYLGAV 129
            |.||||||:|::||||||:::|:|||||:||||.||||.|||::||.|:..::|.||| ||||.:
Mosquito    55 EHLYPAEQIRKMGELGLMAISVKEEYGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPL 119

  Fly   130 QQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSKEA 194
            ...|.|||:|.::..||.|..:..:||||||||||||||||||.|:||.:.:||||.||:|..||
Mosquito   120 THFGNEQQQQKYVAEYTDGSRVGCFALSEPGNGSDAGAASTTATLKGDHWVLNGTKCWITNGYEA 184

  Fly   195 SGGIVFATVDKSMKHKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLGAA 259
            ...:||||.|||:|||||:||:.||:.||.|:.|||.|:|:|.:|||.|:.||..:||..:||..
Mosquito   185 GAAVVFATTDKSLKHKGISAFIVPKETPGFSLGKKEDKLGIRGSSTCSLIFEDCAIPRENLLGEP 249

  Fly   260 GDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATRVE 324
            |.|||||||:||.||||||:||.|||||:||.||||:.||:||||.:|:||.||.|:||||||:|
Mosquito   250 GFGFKIAMQTLDAGRIGIASQALGIAQASLECAVDYANKRIAFGKPIAKLQAIQTKIADMATRLE 314

  Fly   325 ISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRNARV 389
            .:|||||||||||||..|.|||||.|||.|||:||:||||.||:||||||.:|:|||.:||:||:
Mosquito   315 AARLLTWRAAWLKDNKKPFTKEAAQAKLAASEAATYCAHQSIQVLGGMGYVSDMPAERHYRDARI 379

  Fly   390 TEIYEGTSEIQRIVIANAVLREL 412
            ||||||||||||:|||.||::||
Mosquito   380 TEIYEGTSEIQRLVIAGAVIKEL 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 244/371 (66%)
Arc42XP_321112.6 None

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