DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and Acox1

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_056544.2 Gene:Acox1 / 11430 MGIID:1330812 Length:661 Species:Mus musculus


Alignment Length:432 Identity:94/432 - (21%)
Similarity:159/432 - (36%) Gaps:98/432 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 REFANAEL-APKARHHD-----REELY------PAEQVRRLGELGLMSVTVREEYGGSGLDYQAY 101
            ||..|..| .|..:|.|     |.:.|      .|..|:::.|.|:             .|.:..
Mouse    34 REIENLILNDPDFQHEDYNFLTRSQRYEVAVKKSATMVKKMREFGI-------------ADPEEI 85

  Fly   102 AIGMEEVARG-DAAVSIVMGVNNLYLGAVQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDA 165
            ......|.|| ...:.:.:|   ::|..:....||:|::.|.:|....|....||.:|.|:|:..
Mouse    86 MWFKNSVHRGHPEPLDLHLG---MFLPTLLHQATEEQQERFFMPAWNLEITGTYAQTEMGHGTHL 147

  Fly   166 GAASTTA----KLQG---DSYQINGTKAWISN-SKEASGGIVFATVDKSMKHKGITAFLTP---- 218
            ....|||    |.|.   :|..:...|.|... .|.::..||.|.:....:..|:.||:.|    
Mouse   148 RGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITRGECYGLHAFVVPIREI 212

  Fly   219 ---KDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVL----GAAGDG--FKIAMQSLDCGR 274
               |.:||:::.....|.|........|.:::..:||..:|    ....||  .|.....|..|.
Mouse   213 GTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGT 277

  Fly   275 --------IGIAAQATGIAQAALELAVDYSQ-------KRVAFGKHLARLQLIQQKLADMATRVE 324
                    :|.|||:   ...|..:|:.||.       ||......:...|..|.||..:.....
Mouse   278 MVFVRSFLVGSAAQS---LSKACTIAIRYSAVRRQSEIKRSEPEPQILDFQTQQYKLFPLLATAY 339

  Fly   325 ISRLLTWRAAWLKDNGLPITKE------AAMAKLHASES-----ATFCAH----QCIQILGGMGY 374
            ....|   ..::|:..:.|.:.      :.:.:|||..:     .|:.|:    :|....||.||
Mouse   340 AFHFL---GRYIKETYMRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGY 401

  Fly   375 --TTDLPAELYYRNARVTE----IYEGTSEIQRIVIANAVLR 410
              ::.:|      |..||.    .:||.:.:..:..|..:::
Mouse   402 SHSSGIP------NIYVTFTPACTFEGENTVMMLQTARFLMK 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 94/430 (22%)
Acox1NP_056544.2 AXO 3..638 CDD:173839 94/432 (22%)

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