DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and Acadm

DIOPT Version :9

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_031408.1 Gene:Acadm / 11364 MGIID:87867 Length:421 Species:Mus musculus


Alignment Length:379 Identity:147/379 - (38%)
Similarity:207/379 - (54%) Gaps:3/379 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GIACLAALSETHQILQKTCREFANAELAPKARHHDREELYPAEQVRRLGELGLMSVTVREEYGGS 94
            |:.....|:|..:..|.|.|:||..|:.|.|..:|:...||...::|..||||::..:.|..||.
Mouse    34 GLGFSFELTEQQKEFQATARKFAREEIIPVAPEYDKSGEYPFPLIKRAWELGLINAHIPESCGGL 98

  Fly    95 GLDYQAYAIGMEEVARGDAAVSIVMGVNNLYLGAVQQHGTEQQKQDFLVPYTQGEHIAFYALSEP 159
            ||......:..||:|.|...|...:..|:|....|...|.:|||:.:|...|:...:..|.::||
Mouse    99 GLGTFDACLITEELAYGCTGVQTAIEANSLGQMPVILAGNDQQKKKYLGRMTEQPMMCAYCVTEP 163

  Fly   160 GNGSDAGAASTTAKLQGDSYQINGTKAWISNSKEASGGIVFATVDKSMK---HKGITAFLTPKDV 221
            ..|||..|..|.|:.:||.|.|||.|.||:|..:|:...:.|..:...|   .|..|.|:...|.
Mouse   164 SAGSDVAAIKTKAEKKGDEYVINGQKMWITNGGKANWYFLLARSNPDPKVPASKAFTGFIVEADT 228

  Fly   222 PGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATGIAQ 286
            ||:.|.|||..||.|.:.|..:..|||.||:..||...|.||||||.:.|..|..:||.|.|:||
Mouse   229 PGIHIGKKELNMGQRCSDTRGIAFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQ 293

  Fly   287 AALELAVDYSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDNGLPITKEAAMAK 351
            .||:.|..|:..|..|||.|...|.:...||:||.:||::||...||||..|:|...|..|::||
Mouse   294 RALDEATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYASIAK 358

  Fly   352 LHASESATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIA 405
            ..|.:.|...|...:||.||.|:.|:.|.|...|:|::.:|||||::|||::||
Mouse   359 AFAGDIANQLATDAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIA 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 CaiA 37..414 CDD:224871 146/372 (39%)
SCAD_SBCAD 39..410 CDD:173847 145/370 (39%)
AcadmNP_031408.1 CaiA 39..420 CDD:224871 146/374 (39%)
MCAD 41..418 CDD:173846 146/372 (39%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P41367 278..281 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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