DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and acadsb

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_001338578.1 Gene:acadsb / 110437777 ZFINID:ZDB-GENE-070410-109 Length:422 Species:Danio rerio


Alignment Length:415 Identity:156/415 - (37%)
Similarity:247/415 - (59%) Gaps:3/415 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQQLIRVARTLGQRSSGAWSARIIAGGNR-GIACLAALSETHQILQKTCREFANAELAPKARHHD 64
            ::|:.|....:....|.|.:...:..||| ....|.:.||...::::|.|.||...::|.....|
Zfish     8 LRQVSRARAAVRLLCSRAAATETLQDGNRNSFQPLQSFSEEESMMRETVRRFAQECVSPLVSKMD 72

  Fly    65 REELYPAEQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSIVMGVNNLYLGA- 128
            .|.:..|..:|.|.|.|||.:.:..||||||..:.:..:.:||:|:.||:|:::..:.|..:.. 
Zfish    73 EESVMDAGVIRALFEQGLMGMEIGSEYGGSGCSFFSSVLVIEELAKVDASVAVLCDIQNTLINTL 137

  Fly   129 VQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSKE 193
            :.|.||..||:.:| |....:.:..:.|||...||||.:..|.|:...|.:.|||:|.||||::.
Zfish   138 MMQLGTHTQKEKYL-PRLASDMVGSFCLSEAEAGSDAFSLRTQAQKHKDYFIINGSKMWISNAEH 201

  Fly   194 ASGGIVFATVDKSMKHKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLGA 258
            |...:|.|..:.:..::|||.|:..:|..||.|.:||:|:|:||:|||.|..:::.||...|||.
Zfish   202 AGVFLVMANAEPAAGYRGITCFIVDRDTEGLHIGRKENKLGLRASSTCPLTFDNMKVPEECVLGK 266

  Fly   259 AGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATRV 323
            .|.|:|.|:..|:.||||||||..|:||...:..|.|:::||.|||.:...|.:|.::|.:||::
Zfish   267 VGQGYKYAIGMLNGGRIGIAAQMLGLAQGCFDQTVPYTRQRVQFGKRIFDFQGMQHQIAHVATQL 331

  Fly   324 EISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRNAR 388
            |.:||||:.||.||:.|.|..|||.|||.:::|.|:....:|::.:||:|:|.|.|.|.|||:.:
Zfish   332 EAARLLTYNAARLKEAGRPYIKEACMAKYYSAEVASLTTSKCLEWMGGVGFTKDYPIEKYYRDCK 396

  Fly   389 VTEIYEGTSEIQRIVIANAVLRELG 413
            :..|||||:.||...:|..:.:|.|
Zfish   397 IGTIYEGTTNIQLSTMAKMIDQEYG 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 145/371 (39%)
acadsbNP_001338578.1 SCAD_SBCAD 47..417 CDD:173847 145/370 (39%)

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