DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and Slc27a1

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_006253015.1 Gene:Slc27a1 / 94172 RGDID:620927 Length:649 Species:Rattus norvegicus


Alignment Length:573 Identity:131/573 - (22%)
Similarity:201/573 - (35%) Gaps:133/573 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SLGRIIFKNMRNWPKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRGLDHKDIIGISARNTTYI 93
            ::.||.....:..|:.:..:..|.|:..||.|..|::..:|......|....|::.:........
  Rat    80 TIPRIFQAVAQRQPERLALVDASSGICWTFAQLDTYSNAVANLFLQLGFAPGDVVAVFLEGRPEF 144

  Fly    94 MPTAVACFFHGTPFQSANPILEESTLKHLYNISKPKIIF-------TDADHYDKLYSATSAF--- 148
            :...:.....|......|..|....|......|..|.:.       ..|:..::|..:...|   
  Rat   145 VGLWLGLAKAGVVAALLNVNLRREPLAFCLGTSAAKALIYGGEMAAAVAEVSEQLGKSLLKFCSG 209

  Fly   149 --KPEIIL-TTGTKDGVLSIQDLLAPTKTEFFYQPTPLKEGPSQ----TVAILTSSGTTGMPKAV 206
              .||.:| .|...|.:|:    .|||        |||.:.|.:    .:..:.:|||||:|||.
  Rat   210 DLGPESVLPDTQLLDPMLA----EAPT--------TPLAQAPGKGMDDRLFYIYTSGTTGLPKAA 262

  Fly   207 CI-------------------SNDILTQETVFVNGYDTIFISASLDWITGLWATIFSTVNGCTRI 252
            .:                   :||:|         ||.:.:..|...|.|:...|   :.|.| :
  Rat   263 IVVHSRYYRIAAFGHHSYSMRANDVL---------YDCLPLYHSAGNIMGVGQCI---IYGLT-V 314

  Fly   253 ISSKPFAADYFVYLVSKYSITYALIPPEHCCSLLDCPTATPEKLGSLTKLNFGGGRMTQATVERV 317
            :..|.|:|..|.....||:.|......|.|..||..|....|:...: :|..|.|.......|..
  Rat   315 VLRKKFSASRFWDDCVKYNCTVVQYIGEICRYLLRQPVRDVERRHHV-RLAVGNGLRPAIWEEFT 378

  Fly   318 KKLAPNGV--LNSSYGMTE-----------VGFIVFNHGHLKLTAAGNPLPGIQVKIVDDDGNQL 369
            ::.   ||  :...||.||           ||...||...|.     :..|...||:.:|....|
  Rat   379 QRF---GVRQIGEFYGATECNCSIANMDGKVGSCGFNSRILT-----HVYPIRLVKVNEDTMEPL 435

  Fly   370 GVNQ--------------TGEIIVHNGF-SWNGYFADPEATKAMQDEEGWFHTGDMGY------- 412
            ..:|              .|:|...:.. .::||.:|....|.:  ....|..||..|       
  Rat   436 RDSQGLCIPCQPGEPGLLVGQINQQDPLRRFDGYVSDSATNKKI--AHSVFRKGDSAYLSGDVLV 498

  Fly   413 FDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALVVREDN 477
            .||..|:|..||..:..:|:|..:...|||||:..|.....|.|.||      .|||.    |..
  Rat   499 MDELGYMYFRDRSGDTFRWRGENVSTTEVEAVLSRLLGQTDVAVYGV------AVPGV----EGK 553

  Fly   478 ATLTAQQVIDHVAKRLPDIQKQLRAGVQFADEIPQNHNGKVVRRYARDLFVAL 530
            |.:.|          :.|...||.....: .|:.     ||:..||:.:|:.|
  Rat   554 AGMAA----------IADPHNQLDPNSMY-QELQ-----KVLASYAQPIFLRL 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 130/570 (23%)
AFD_class_I 46..518 CDD:302604 122/542 (23%)
Slc27a1XP_006253015.1 PRK08279 45..649 CDD:236217 131/573 (23%)
AFD_class_I 107..614 CDD:302604 126/546 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342878
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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