DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4830 and AT1G20490

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001322801.1 Gene:AT1G20490 / 838637 AraportID:AT1G20490 Length:447 Species:Arabidopsis thaliana


Alignment Length:433 Identity:111/433 - (25%)
Similarity:177/433 - (40%) Gaps:55/433 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QNNP--FKPETSLGRIIFKNMRNWPKNVCQISDSEGVEVTFGQALTWAI--RIAQQLKSR-GLDH 79
            :.||  ..|..||....|.:.:........|..|.|..:||..  .|.:  |:|..|... |:..
plant    26 KRNPLCLPPNPSLDVTTFISSQPQRGTTAFIDASTGHRLTFSD--LWRVVDRVADCLYHEVGIRR 88

  Fly    80 KDIIGISARNTTYIMPTAVACFFHGTPFQSANPILEESTLKHLYNISKPKIIFTDADHYDKLYSA 144
            .|::.|.:.|:.||....::....|....:||.:.....:......|.|.::||.:....||.:|
plant    89 GDVVLILSPNSIYIPVVCLSVMSLGAVVTTANTLNTSGEISKQIAQSNPTLVFTTSQLAPKLAAA 153

  Fly   145 TSAF------KPEIILTTGTK-DGVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSGTTGM 202
            .|..      :..:.||:|.: .|:||  :::   |.|...|....:.....|..:|.||||||.
plant   154 ISVVLTDEEDEKRVELTSGVRVVGILS--EMM---KKETSGQRVRDRVNQDDTAMMLYSSGTTGT 213

  Fly   203 PKAVCISNDILTQETVFVNGY-------DTIFI-SASLDWITGLWATIFSTVNGCTRIISSKPFA 259
            .|.|..|:..|   |.:|..|       |.||: :..:....||.|....:|...:.::..:.|.
plant   214 SKGVISSHRNL---TAYVAKYIDDKWKRDEIFVCTVPMFHSFGLLAFAMGSVASGSTVVILRRFG 275

  Fly   260 ADYFVYLVSKYSITYALIPPEHCCSLLDCPTATPEK--LGSLTKLNFGGGRMTQATVERVKKLAP 322
            .|..:..|.||..|...:.|....::::.......|  |.||.|:..||..:::..::...:..|
plant   276 LDDMMQAVEKYKATILSLAPPVLVAMINGADQLKAKYDLTSLRKVRCGGAPLSKEVMDSFLEKYP 340

  Fly   323 NGVLNSSYGMTEVGFIVFNHG----------HLKLTAAGNPLPGIQVKIVD-DDGNQLGVNQTGE 376
            ...:...|.:||      :||          .||..|.|....||:.:||| |.|..:||||.||
plant   341 TVNIFQGYALTE------SHGSGASTESVEESLKYGAVGLLSSGIEARIVDPDTGRVMGVNQPGE 399

  Fly   377 IIVHNGFSWNGYFADPEATKAMQDEEGWFH------TGDMGYF 413
            :.:.......|||.:.|||....:.|||..      :..||::
plant   400 LWLKGPSISKGYFGNEEATNETINLEGWLKLEISAISMKMGFY 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 111/433 (26%)
AFD_class_I 46..518 CDD:302604 105/405 (26%)
AT1G20490NP_001322801.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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