DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and AT1G20480

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_173472.1 Gene:AT1G20480 / 838636 AraportID:AT1G20480 Length:565 Species:Arabidopsis thaliana


Alignment Length:534 Identity:144/534 - (26%)
Similarity:235/534 - (44%) Gaps:58/534 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NPFKPETSL-------GRIIFKNMRNWPKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRGLDH 79
            |.|...||.       |:.:|            :....|..::|.:......|:|..|.:.|:..
plant    46 NQFLDVTSFIASQPHRGKTVF------------VDAVTGRRLSFPELWLGVERVAGCLYALGVRK 98

  Fly    80 KDIIGISARNTTYIMPTAVACFFHGTPFQSANPILEESTLKHLYNISKPKIIFTDADHYDKLYSA 144
            .:::.|.:.|:......:::....|....:||||.....:......|:|.:.||......||.:|
plant    99 GNVVIILSPNSILFPIVSLSVMSLGAIITTANPINTSDEISKQIGDSRPVLAFTTCKLVSKLAAA 163

  Fly   145 TSAFKPEIIL------TTGTKDGVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSGTTGMP 203
            ::...|.:::      :....|.|..:..|....:||........:.....|.|:|.||||||..
plant   164 SNFNLPVVLMDDYHVPSQSYGDRVKLVGRLETMIETEPSESRVKQRVNQDDTAALLYSSGTTGTS 228

  Fly   204 KAVCISNDILTQETVFVNGYDTIF--------------ISASLDWITGLWATIFSTVNGCTRIIS 254
            |.|.:|:..|   ...|..|...|              |.....:.|||.|.      |.|.::.
plant   229 KGVMLSHRNL---IALVQAYRARFGLEQRTICTIPMCHIFGFGGFATGLIAL------GWTIVVL 284

  Fly   255 SKPFAADYFVYLVSKYSITYALIPPEHCCSLLDCPTATPEK--LGSLTKLNFGGGRMTQATVERV 317
            .| |.....:..|..:..:|..:.|....::::.......|  |.||..:..||..:::...|:.
plant   285 PK-FDMAKLLSAVETHRSSYLSLVPPIVVAMVNGANEINSKYDLSSLHTVVAGGAPLSREVTEKF 348

  Fly   318 KKLAPNGVLNSSYGMTE---VGFIVFNHGHLK-LTAAGNPLPGIQVKIVD-DDGNQLGVNQTGEI 377
            .:..|...:...||:||   :...:||....| ..|:|...|.::.|||| |.|..||||||||:
plant   349 VENYPKVKILQGYGLTESTAIAASMFNKEETKRYGASGLLAPNVEGKIVDPDTGRVLGVNQTGEL 413

  Fly   378 IVHNGFSWNGYFADPEATKAMQDEEGWFHTGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVE 442
            .:.:.....|||.:.|||.:..|.|||..|||:.|.|.|.::::.||.||::|..|.|:.|||:|
plant   414 WIRSPTVMKGYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKELIKCNGYQVAPAELE 478

  Fly   443 AVIDELPEVKRVCVIGVYDETQGDVPGALVVREDNATLTAQQVIDHVAKRLPDIQKQLRAGVQFA 507
            |::...||:....||.:.|...|..|.|.:||:..:.|:..:::..|||::...:|..:  |.|.
plant   479 ALLLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSNLSESEIMGFVAKQVSPYKKIRK--VTFL 541

  Fly   508 DEIPQNHNGKVVRR 521
            ..||:|.:||::||
plant   542 ASIPKNPSGKILRR 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 144/534 (27%)
AFD_class_I 46..518 CDD:302604 135/498 (27%)
AT1G20480NP_173472.1 PLN02574 27..562 CDD:215312 144/534 (27%)
4CL 43..557 CDD:213272 144/534 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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