DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and AT4G05160

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_192425.1 Gene:AT4G05160 / 825864 AraportID:AT4G05160 Length:544 Species:Arabidopsis thaliana


Alignment Length:532 Identity:160/532 - (30%)
Similarity:256/532 - (48%) Gaps:52/532 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PFKPETSLGRIIFKNMRNWPKNVCQISDSE-GVEVTFGQALTWAIRIAQQLKSRGLDHKDIIGIS 86
            |..|.|||...:|:|..::|..:. |:||: |..:||.|..:...|:|......|:...|::.|.
plant    22 PKDPNTSLVSFLFRNSSSYPSKLA-IADSDTGDSLTFSQLKSAVARLAHGFHRLGIRKNDVVLIF 85

  Fly    87 ARNTTYIMPTAVACFFH----GTPFQSANPILEESTLKHLYNISKPKIIFTDADHYDKLYSATSA 147
            |.| :|..|   .||..    |..|.:|||:...:.:......|.||||.:....:||:    ..
plant    86 APN-SYQFP---LCFLAVTAIGGVFTTANPLYTVNEVSKQIKDSNPKIIISVNQLFDKI----KG 142

  Fly   148 FKPEIILTTGTKDGV----------LSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSGTTGM 202
            |...::| .|:||.|          ||..:::..::....|....:|:  |.|.|:|.||||||.
plant   143 FDLPVVL-LGSKDTVEIPPGSNSKILSFDNVMELSEPVSEYPFVEIKQ--SDTAALLYSSGTTGT 204

  Fly   203 PKAVCISND-------ILTQETVFVNGYDTIFIS-ASLDWITGLWATIFSTVNGCTRIISSKPFA 259
            .|.|.:::.       ::|.:...:..|..:|:. ..:..:.||....:|.:.....::|...|.
plant   205 SKGVELTHGNFIAASLMVTMDQDLMGEYHGVFLCFLPMFHVFGLAVITYSQLQRGNALVSMARFE 269

  Fly   260 ADYFVYLVSKYSITYALIPPEHCCSLLDCPTATPEKLGSLTKLNFGGGRMTQATVERVKKLAPNG 324
            .:..:..:.|:.:|:..:.|....:|..........|.||..:..|...:.:..:|...:..||.
plant   270 LELVLKNIEKFRVTHLWVVPPVFLALSKQSIVKKFDLSSLKYIGSGAAPLGKDLMEECGRNIPNV 334

  Fly   325 VLNSSYGMTEVGFIVF---------NHGHLKLTAAGNPLPGIQVKIVD-DDGNQLGVNQTGEIIV 379
            :|...|||||...||.         |.|     :||...||::.:||. :.|.....||.|||.|
plant   335 LLMQGYGMTETCGIVSVEDPRLGKRNSG-----SAGMLAPGVEAQIVSVETGKSQPPNQQGEIWV 394

  Fly   380 HNGFSWNGYFADPEATKAMQDEEGWFHTGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAV 444
            .......||..:|:|||...|::.|.||||:|||:||..||:.||.||::|:||.|:.|||:|.:
plant   395 RGPNMMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKELIKYKGFQVAPAELEGL 459

  Fly   445 IDELPEVKRVCVIGVYDETQGDVPGALVVREDNATLTAQQVIDHVAKRLPDIQKQLRAGVQFADE 509
            :...|::....||...||..|:||.|.|||..|:::|.|.:...:||::.. .|:||. |.|...
plant   460 LVSHPDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFIAKQVAP-YKRLRR-VSFISL 522

  Fly   510 IPQNHNGKVVRR 521
            :|::..||::||
plant   523 VPKSAAGKILRR 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 160/532 (30%)
AFD_class_I 46..518 CDD:302604 149/504 (30%)
AT4G05160NP_192425.1 4CL 21..536 CDD:341230 160/532 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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