DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and 4CL2

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_188761.1 Gene:4CL2 / 821678 AraportID:AT3G21240 Length:556 Species:Arabidopsis thaliana


Alignment Length:550 Identity:151/550 - (27%)
Similarity:259/550 - (47%) Gaps:54/550 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKLPCSYDAENKIWKGIPQNNPFKPETSLGRIIFKNMRNWPKNVCQISDSEGVEVTFGQALTWAI 66
            |:||..|         ||.:.|      |...||:|:..:....|.|:...|...|:......:.
plant    25 SRLPDIY---------IPNHLP------LHDYIFENISEFAAKPCLINGPTGEVYTYADVHVTSR 74

  Fly    67 RIAQQLKSRGLDHKDIIGISARNTTYIMPTAVACFFHGTPFQSANPILEESTLKHLYNISKPKII 131
            ::|..|.:.|:...|::.|...|:..::.|.:|..|.|....||||....:.:......|..|:|
plant    75 KLAAGLHNLGVKQHDVVMILLPNSPEVVLTFLAASFIGAITTSANPFFTPAEISKQAKASAAKLI 139

  Fly   132 FTDADHYDKLYSATSAFKPEIILTTGTKDGV----LSIQDLLAPTKTEFFYQP----TPLKEGPS 188
            .|.:.:.||:.:..:   ..:::.|...|.:    |...:|   |::|   :|    .|.|..|.
plant   140 VTQSRYVDKIKNLQN---DGVLIVTTDSDAIPENCLRFSEL---TQSE---EPRVDSIPEKISPE 195

  Fly   189 QTVAILTSSGTTGMPKAVCISNDILT----------QETVFVNGYDTIFISASLDWITGLWATIF 243
            ..||:..||||||:||.|.:::..|.          ...::.|..|.|.....:..|..|.:.:.
plant   196 DVVALPFSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFNRDDVILCVLPMFHIYALNSIML 260

  Fly   244 STVN-GCTRIISSKPFAADYFVYLVSKYSITYALIPPEHCCSLLDCPTATPEKLGSLTKLNFGGG 307
            .::. |.|.:|..| |.....:..:.:..:|.|::.|....::...|......|.|:..:..|..
plant   261 CSLRVGATILIMPK-FEITLLLEQIQRCKVTVAMVVPPIVLAIAKSPETEKYDLSSVRMVKSGAA 324

  Fly   308 RMTQATVERVKKLAPNGVLNSSYGMTEVG-FIVFNHGH------LKLTAAGNPLPGIQVKIVD-D 364
            .:.:...:.:....||..|...|||||.| .:..:.|.      :|..|.|..:...::||:| |
plant   325 PLGKELEDAISAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKILDPD 389

  Fly   365 DGNQLGVNQTGEIIVHNGFSWNGYFADPEATKAMQDEEGWFHTGDMGYFDEDDYLYMTDRKKEVL 429
            .|:.|..|:.|||.:.......||..||.||.:..|::||.||||:|:.|:||.|::.||.||::
plant   390 TGDSLPRNKPGEICIRGNQIMKGYLNDPLATASTIDKDGWLHTGDVGFIDDDDELFIVDRLKELI 454

  Fly   430 KWKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALVVREDNATLTAQQVIDHVAKRLP 494
            |:||.|:.|||:|:::...||:..|.|:.:.:|..|:||.|.|||..::.::..::...|:|::.
plant   455 KYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSNISEDEIKQFVSKQVV 519

  Fly   495 DIQKQLRAGVQFADEIPQNHNGKVVRRYAR 524
             ..|::.. |.|.|.||:..:||::|:..|
plant   520 -FYKRINK-VFFTDSIPKAPSGKILRKDLR 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 146/533 (27%)
AFD_class_I 46..518 CDD:302604 137/498 (28%)
4CL2NP_188761.1 PLN02246 14..553 CDD:215137 150/549 (27%)
4CL 32..546 CDD:213272 146/531 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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