DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and acsf2

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001038884.2 Gene:acsf2 / 751707 ZFINID:ZDB-GENE-060825-7 Length:606 Species:Danio rerio


Alignment Length:574 Identity:108/574 - (18%)
Similarity:219/574 - (38%) Gaps:58/574 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKLPCSYDAENKIWKGIP----------QNNPFKPETSLGRIIFKNMRNWPKNVCQISDSEGVEV 56
            |:..|:...:|.  ..||          .::|.:..| :.:.:...:..:|.....:...:|:..
Zfish    33 SQQSCAIHVDNP--PSIPTLTTSYVHGLSSHPLQSST-VDQCLQATVERYPDREAMVFVQDGIRK 94

  Fly    57 TFGQALTWAIRIAQQLKSRGLDHKDIIGISARNTTYIMPTAVACFFHGTPFQSANPILEESTLKH 121
            ||.:......:.|..|.:.||...|.:|:...|....:....|....|....:.||..:...::.
Zfish    95 TFAEFYQDVEKAAAGLLAAGLKRGDRLGMWGPNIYEWVLMQFATAKAGIILVAVNPAYQLQEVEF 159

  Fly   122 -LYNISKPKIIFT---DADHY--------DKLYSAT-----SAFKPE---IILTTGTKDGVLSIQ 166
             |..:....::..   .:.||        .::.:|:     |:..|:   :|:|...:.|...::
Zfish   160 ALRKVQCNAVVCPTKFKSQHYCDMLKQLCPEMETASPGGIKSSRLPDLHTVIVTDSQQPGSFLLK 224

  Fly   167 DLLAPTKTEFFYQPTPLK-----EGPSQTVAILTSSGTTGMPKAVCISNDILTQETVFVN---GY 223
            ||:....::.:.|...|:     :.|   :.|..:|||||.||...:|:..:.....|..   ||
Zfish   225 DLMQAGSSQHYQQLQDLQKKLVCDDP---INIQFTSGTTGKPKGATLSHHNIVNNAYFTGMRIGY 286

  Fly   224 D-----TIFISASLDWITG-LWATIFSTVNGCTRIISSKPFAADYFVYLVSKYSITYALIPPEHC 282
            :     .|.:...|....| :...:...:.|.|.|..|..:.....:..:.|...|:....|...
Zfish   287 NWRKNVRICLPVPLYHCFGSVGGGVIMALYGTTVIFPSTGYDGRANLRAIEKEKCTFVYGTPTMY 351

  Fly   283 CSLLDCPTATPEKLGSLTKLNFGGGRMTQATVERVKKLAPNGVLNSSYGMTEVGFIVF-----NH 342
            ..:|..|......|.|:......|.......:.::..:.....:...||.||...:.|     :.
Zfish   352 IDMLGQPDLAKFDLSSVRGGIAAGSPCPPEVMRKILNVMGIKEMVIGYGTTENSPVTFCGFPVDS 416

  Fly   343 GHLKLTAAGNPLPGIQVKIVD-DDGNQLGVNQTGEIIVHNGFSWNGYFADPEATKAMQDEEGWFH 406
            ...|:...|...|..:.|:|| ..|..:.:...||:::........|:.|.|.|:....::.|:.
Zfish   417 AERKIETVGCISPHTEAKVVDPTTGEIVPLGAQGELMIRGYCVMLEYWQDEEKTRECITKDRWYK 481

  Fly   407 TGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGAL 471
            |||:...|:..|..:..|.|:::...|..::|||:|..:...|::....|:||.||..|:...|.
Zfish   482 TGDIASLDQFAYCKIEGRIKDLIIRGGENIYPAEIEQFLHTHPKILEAQVVGVKDERMGEEVCAC 546

  Fly   472 VVREDNATLTAQQVIDHVAKRLPDIQKQLRAGVQFADEIPQNHNGKVVRRYARD 525
            :..::....|.:::..:...::  ...::...:.|..:.|....||:.:...|:
Zfish   547 IRLKEGQECTVEEIKAYCKGKI--AHYKVPRYILFVQDYPLTITGKIQKHKLRE 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 105/558 (19%)
AFD_class_I 46..518 CDD:302604 98/511 (19%)
acsf2NP_001038884.2 PRK08315 53..606 CDD:236236 103/552 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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