DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and Acsf2

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001030123.1 Gene:Acsf2 / 619561 RGDID:1562656 Length:615 Species:Rattus norvegicus


Alignment Length:577 Identity:123/577 - (21%)
Similarity:214/577 - (37%) Gaps:122/577 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SLGRIIFKNMRNWPKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRGLDHKDIIGISARNTTYI 93
            ::|..:....:.:|.....:...|.:.:.|.|......|.|..|.|.||...|.:|:...|:...
  Rat    73 TVGECLDATAQRFPNREALVIIHENIRLNFAQLKEEVDRAASGLLSIGLRKGDRLGMWGPNSYAW 137

  Fly    94 MPTAVACFFHGTPFQSANPILEESTLKH-LYNISKPKIIFTDADHYDKLYSATSAFKPEI----- 152
            :...:|....|....|.||..:.|.|:: |..:....|:|.......:.|:......||:     
  Rat   138 VLIQLATAQAGIILVSVNPAYQASELEYVLRKVGCKGIVFPKQFKTQQYYNILKQVCPELEKAQP 202

  Fly   153 ---------ILTTGTKDGVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVA---------------- 192
                     .|||     |:|:.   ||..............|..|.:|                
  Rat   203 GALKSERLPDLTT-----VISVD---APLPGTLLLDEVVAAGGKEQNLAQLRYHQGFLSCYDPIN 259

  Fly   193 ILTSSGTTGMPKAVCISNDILTQETVFVNGYDTI----------------FISASLDWITG-LWA 240
            |..:|||||.||...:|:..:      ||..:.|                .:...|....| :..
  Rat   260 IQFTSGTTGNPKGATLSHHNI------VNNSNLIGQRLKMPAKTAEELRMVLPCPLYHCLGSVGG 318

  Fly   241 TIFSTVNGCTRIISSKPFAADYFVYLVSKYSITYALIPPEHCCSLLDCP---------------- 289
            |:.|.|:|.|.::||..|.....:..:|:...|.....|.....:|:.|                
  Rat   319 TMVSVVHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILNQPDFSSYDFTTIRGGVIA 383

  Fly   290 --TATPEKLGS-LTKLNFGGGRMTQATVERVKKLAPNGVLNSSYGMTE---VGFIVFNHGHL--K 346
              .|.||.:.: ::|:|             :|:|.      ..||.||   |.|:.|....|  |
  Rat   384 GSLAPPELIRAIISKMN-------------MKELV------VVYGTTENSPVTFMNFPEDTLEQK 429

  Fly   347 LTAAGNPLPGIQVKIVD-DDGNQLGVNQTGEIIVHNGFSWNGYFADPEATKAMQDEEGWFHTGDM 410
            ..:.|..:|..:.:||: :.|....:|..||:.:.......||:.:|:.|.....::.|:.|||:
  Rat   430 AGSVGRIMPHTEAQIVNMETGELTKLNMPGELCIRGYCVMQGYWGEPQKTFETVGQDRWYRTGDI 494

  Fly   411 GYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALVVRE 475
            ...||..:..:..|.|:::...|..::|||:|....:.|:|:...|:||.|:..|:...|.:..:
  Rat   495 ASMDEQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMGEEICACIRLK 559

  Fly   476 DNATLTAQQV-------IDHVAKRLPDIQKQLRAGVQFADEIPQNHNGKVVRRYARD 525
            ...|.|.:::       |.|.  ::|..       :.|.:..|...:||:.:...|:
  Rat   560 SGETTTEEEIKAFCKGKISHF--KIPRY-------IVFVEGYPLTVSGKIQKFKLRE 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 123/577 (21%)
AFD_class_I 46..518 CDD:302604 119/551 (22%)
Acsf2NP_001030123.1 PRK08315 57..615 CDD:236236 123/577 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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