DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and dip2cb

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_005171457.1 Gene:dip2cb / 569986 ZFINID:ZDB-GENE-070912-589 Length:1595 Species:Danio rerio


Alignment Length:632 Identity:127/632 - (20%)
Similarity:211/632 - (33%) Gaps:182/632 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 IIFKNMRNW-----PKNVC-QISDSEGVEVTFGQALTW------AIRIAQQLKSRGL----DHKD 81
            :....|..|     |:::. .:.:|.|   ..|.:||.      |.:||..|..||.    ||..
Zfish   999 LFLSEMLQWRAQTTPEHILYTLINSRG---AVGSSLTCLQLHKRAEKIATLLYERGQLRDGDHVA 1060

  Fly    82 IIGISARNTTYIMPTAVACFFHGTPFQSANPILEE-----------STLKHLYNISKPKIIFTDA 135
            ::        |.....:...|:|..:....||...           .|:|.:..:|:...:.| :
Zfish  1061 LV--------YPPGLDLIAAFYGCLYAGCIPITVRPPHPQNISTTLPTVKMILEVSRSVCVMT-S 1116

  Fly   136 DHYDKLYSATSA-----FK--PEIILTTGTKDGVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAI 193
            ....||..:..|     ||  |.|:.|           |.|...:....::|.    .|.....:
Zfish  1117 QMISKLLKSRDASVAVDFKLWPPILET-----------DDLPKRRCPLMFKPC----DPDSLAYL 1166

  Fly   194 LTSSGTTGMPKAVCISND----ILTQETVFVNGYDTIFISASLDWITG----LWATIFSTVNGCT 250
            ..|..||||...|.:|::    :.....:....|.:..::..||...|    ||..........:
Zfish  1167 DFSVSTTGMLAGVKMSHNATSALCRSVKLQCELYPSREVAVCLDPYCGLGFVLWCLCSVYAGQQS 1231

  Fly   251 RIISSKPFAADYFVYL--VSKYSI-----TYALIPPEHCCSLLDCPTATPEKLG----------- 297
            .:||......:..::|  ||::.:     :|:::  |.|...|...|.|.:..|           
Zfish  1232 VLISPMDLEVNPALWLQAVSQFKVRDTFCSYSVM--ELCTRSLSSLTDTLKARGMDLTRVRSCVV 1294

  Fly   298 ------------SLTKL--NFG----------GGRMTQATV---ERVKKLAPNGVLNSSYGMTEV 335
                        |..||  :.|          |.|:..|..   .|:.|||..|..........|
Zfish  1295 VAEERPRVALTQSFCKLFKDVGLHPRAVSTAFGCRVNLAICLQPHRLGKLAEQGTSGPDPTTVYV 1359

  Fly   336 GFIVFNHGHLKLTAAGNP-----------LPGIQVKIVD-DDGNQLGVNQTGEIIVHNGFSWNGY 388
            ......|..::|...|:|           |||:::.|.: :....:|.:..|||.||:..:.:||
Zfish  1360 DMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPIGDSHLGEIWVHSPQNASGY 1424

  Fly   389 FADPEATKAMQDEEG-----------WFHTGDMGYF----------DEDDYLYMTDRKKEVLKWK 432
            |..........|..|           |..||.:|:.          :..|.||:.....||::.:
Zfish  1425 FTVFGEENVRSDHFGARLSFGDTQTVWARTGYLGFLRRTDLTDASGERHDALYVVGALDEVMELR 1489

  Fly   433 GLQMWPAEVEAVIDELPEVKRVCVIGVYD-------ETQGDVPGAL--------VVREDNATLTA 482
            |::..|.::|..|.........|.:..:.       |.:|....||        ||.|::..:..
Zfish  1490 GMKYHPIDIETSIIRAHRNITECAVFTWTNLLVVVVELEGSEQEALDLVPMVTNVVLEEHYLIVG 1554

  Fly   483 QQVIDHVAKRLPDIQKQLRAGVQFADEIPQNHNGKVVRRYARDLFVA 529
            ..|:             :..||     ||.|..|:..|.:.||.|:|
Zfish  1555 VVVV-------------VDTGV-----IPINSRGEKQRMHLRDGFLA 1583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 126/630 (20%)
AFD_class_I 46..518 CDD:302604 119/601 (20%)
dip2cbXP_005171457.1 DMAP_binding 6..114 CDD:283995
CaiC 349..940 CDD:223395
AFD_class_I 375..937 CDD:302604
AMP-binding 1005..1489 CDD:278902 102/512 (20%)
AFD_class_I 1022..1584 CDD:302604 124/609 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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