DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and acsl1a

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001027007.1 Gene:acsl1a / 555308 ZFINID:ZDB-GENE-050809-115 Length:697 Species:Danio rerio


Alignment Length:517 Identity:123/517 - (23%)
Similarity:179/517 - (34%) Gaps:125/517 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GQALTWAI--RIAQQLKSRG--LDHK-------DIIGISARNTTYIMPTAVACFFHGTPFQSANP 112
            ||...|..  .:|.:.:..|  |.|:       ..|||.|:|......:.:||:.:..   .|.|
Zfish   115 GQPYKWLSYKEVADRAEFAGSALLHRGHSQSGDKYIGIFAQNRPEWTISELACYTYSL---VAVP 176

  Fly   113 ILEE-STLKHLYNISKPKIIFTDADHYDKL-----------YSATS-----AFKPEIILTTGTKD 160
            :.:. .|....|.|.|..|.....|..||.           :|.|:     :|..|  ||...::
Zfish   177 LYDTLGTEAISYVIDKASITTIICDIADKARLILDCVSGRKHSVTTIVIMESFDSE--LTAQAQN 239

  Fly   161 ---GVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSGTTGMPKAVCISND----------- 211
               .::|:::|.|..|..   ..||:...|.....|..:|||||.||...:::.           
Zfish   240 CGIDIISLKELEAIGKAN---HKTPIPPKPEDLALICFTSGTTGNPKGAMLTHGNVVSNCSAFIK 301

  Fly   212 ------ILTQETVFVN-----------------------GYDTIFISASLDWITGLWATIFSTVN 247
                  :|.|..:.::                       ||....|...:|.:..|..|||..|.
Zfish   302 ITEVHCMLNQTDIHISYLPLAHMFERVVEGVLLCHGAKIGYFQGDIRLLMDDLKNLKPTIFPVVP 366

  Fly   248 GCTRIISSKPFAADYFVYLVSKYSITYALIPPEHCCSLLDCPTATPE------------------ 294
            .....:..|.|.              .|..|.:..  |||..|:..|                  
Zfish   367 RLLNRMFDKIFG--------------QANTPLKRW--LLDFATSRKEAELKSGVVRKDSMWDKLI 415

  Fly   295 ------KLGSLTKLNFGGGRMTQATVERVKKLAPNGVLNSSYGMTE--VGFIVFNHGHLKLTAAG 351
                  .||...:|...|......||....:.|........||.||  .|..:...|.......|
Zfish   416 FSKVQASLGGRVRLMITGAAPVSPTVLTFLRAALGCQFYEGYGQTECTAGCTMSLPGDWTAGHVG 480

  Fly   352 NPLPGIQVKIVD-DDGNQLGVNQTGEIIVHNGFSWNGYFADPEATKAMQDEEGWFHTGDMGYFDE 415
            .|||...||:|| .:.|....|..||:.|.....:.||..|||.|....|:.||.||||:|.:..
Zfish   481 APLPCNFVKLVDVAEMNYFAANGEGEVCVKGPNVFQGYLKDPEQTSGAVDKAGWLHTGDIGKWLP 545

  Fly   416 DDYLYMTDRKKEVLKW-KGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALVVRED 476
            :..|.:.||||.:.|. :|..:.|.::|.:......|.:|.|.|  |..|..:.|.:|...|
Zfish   546 NGTLKIIDRKKHIFKLAQGEYIAPEKIENIYIRSDPVAQVFVHG--DSLQACLVGVVVPDPD 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 123/517 (24%)
AFD_class_I 46..518 CDD:302604 123/517 (24%)
acsl1aNP_001027007.1 PLN02736 88..695 CDD:178337 123/517 (24%)
LC-FACS_euk 116..692 CDD:213293 122/516 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583155
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.