DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and slc27a1b

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001070716.1 Gene:slc27a1b / 553512 ZFINID:ZDB-GENE-061013-672 Length:648 Species:Danio rerio


Alignment Length:560 Identity:129/560 - (23%)
Similarity:208/560 - (37%) Gaps:131/560 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRGLDHKDIIGISARNTTYIMPTAVACFFHGTP 106
            |:....:.:|.|...:|.:....:..:||.:.::|....|::.|...:    .|..||.:. |..
Zfish    92 PEKAALVDESSGEVWSFSELDRRSNAVAQWVLAQGWRSGDVVAIFMES----RPQMVALWL-GMA 151

  Fly   107 FQSANPI-----LEESTLKHLYNISKPKIIFTDADHYD------------KLYSATSAFKPEII- 153
            .....|.     |...:|.|...:|....:...|:..|            .|:|..|| ..|:: 
Zfish   152 KVGVEPALINFNLRRDSLIHCMGVSGACGMVFGAELLDVVLEVRESLRSLSLFSCGSA-PAEMLD 215

  Fly   154 -LTTGTKDGVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSGTTGMPKAVCISNDILTQET 217
             |:....|.:||......|....        .:|.:..:..:.:|||||:|||..:.:....:..
Zfish   216 SLSAADLDALLSKSPETPPAVAH--------NKGFNDRLFYIYTSGTTGLPKAAIVVHSRYYRIA 272

  Fly   218 VF------VNGYDTIF----ISASLDWITGLWATIFSTVNGCTRIISSKPFAADYFVYLVSKYSI 272
            .|      :...|.::    :..|...|.|:...:   ::|.|.:|..| |:|..|.....||:.
Zfish   273 AFSYYSFGLQPDDVVYCCLPLYHSAGNIIGVGQCL---LHGLTVVIRRK-FSASRFWDDCVKYNC 333

  Fly   273 TYALIPPEHCCSLLDCPTATPEKL-------GSLTKLNFGGGRMTQATVERVKKLAPNGVLNSSY 330
            |......|.|..||..|....|.|       |:..:.|.....|.:.:|:|:.:.         |
Zfish   334 TVVQYIGEICRYLLSQPVRPSESLHRVRVAMGNGLRPNVWESFMKRFSVKRIGEF---------Y 389

  Fly   331 GMTEVGFIVFNHGHLKLTAAG-NP--LPG---IQVKIVDDDGNQLGVNQTG----------EIIV 379
            |.||....:.|..: |:.|.| |.  ||.   |::...|:|..:|..:..|          .|||
Zfish   390 GATECNCSLANMDN-KVGACGFNSVVLPSVYPIRLLRADEDTMELIRDSRGLCVPCKPGEPGIIV 453

  Fly   380 HNG--------FSWNGYFADPEAT------KAMQDEEGWFHTGDMGYFDEDDYLYMTDRKKEVLK 430
              |        ..::|| |:.|||      ...:..:..:.:||:...||..|:|..||..:..:
Zfish   454 --GRINPQDPLRRFDGY-ANEEATSKKISHNVFRKGDSAYVSGDLMVMDELGYVYFRDRGGDTFR 515

  Fly   431 WKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALVVREDNATLTA----QQVIDHVAK 491
            |:|..:...|||.|:..|.:...|.|.||      .|||.    |..|.:.|    :.|.| ...
Zfish   516 WRGENVSTTEVEGVLSALLKQTDVAVYGV------SVPGV----EGKAGMAAIADPENVFD-CET 569

  Fly   492 RLPDIQKQLRAGVQFADEIPQNHNGKVVRRYARDLFVALS 531
            .|.|:|..|.:                   |||.:|:.||
Zfish   570 FLRDVQNALPS-------------------YARPVFLRLS 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 127/556 (23%)
AFD_class_I 46..518 CDD:302604 122/541 (23%)
slc27a1bNP_001070716.1 PRK08279 60..648 CDD:236217 129/560 (23%)
AFD_class_I 103..613 CDD:302604 127/549 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582996
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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