DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and slc27a1a

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001013555.1 Gene:slc27a1a / 541410 ZFINID:ZDB-GENE-050320-112 Length:647 Species:Danio rerio


Alignment Length:616 Identity:126/616 - (20%)
Similarity:205/616 - (33%) Gaps:194/616 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IWKGIPQNNPFKPETSLGRIIFKNMRNWPKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRGLD 78
            :|..:...|      ::..|..:.:...|.....:.::.|...||.|....:..:|....|:|..
Zfish    68 LWHYMRNRN------TIPSIFAQTVARHPDKPALVYEATGETWTFSQLDQISNAVAHWALSQGWT 126

  Fly    79 HKDIIGISARNTTYIMPTAVACFFHGTPFQSA---------------NPILEESTLKHLYNISKP 128
            ..|:               ||.|....|.|.|               |..|...:|.|...:|..
Zfish   127 SGDV---------------VALFMESRPLQVALWLGLAKVGVEAALINFNLRRDSLLHCVGVSAS 176

  Fly   129 KIIFTDADHYDKLYSATSAFKPEII-LTTGTKDGVLSIQDLLAPTKTEFFYQPTPL--------K 184
            :.|...|:..|.:...:.:....:: .:||...     .||:|..|.:      ||        :
Zfish   177 RGIVFGAELADAVSEVSHSLSQTMVRFSTGDLK-----PDLMAALKCQ------PLDPILASAPR 230

  Fly   185 EGPSQTVA--------ILTSSGTTGMPKAVCI-------------------SNDILTQETVFVNG 222
            ..||.||:        .:.:|||||:|||..:                   .:||:         
Zfish   231 HPPSCTVSKGFNDHLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYLSFRMRPDDII--------- 286

  Fly   223 YDTIFISASLDWITGLWATIFSTVNGCTRIISSKPFAADYFVYLVSKYSITYALIPPEHCCSLLD 287
            ||.:.:..|...|.|:...:   ::|.|.::..| |:|..|.....|::.|......|.|..||.
Zfish   287 YDCLPLYHSAGNIMGVGQCL---IHGLTVVVKRK-FSASRFWEDCIKHNCTVVQYIGEICRYLLA 347

  Fly   288 CPTATPEKLGSLTKLNFGGG---RMTQATVE--RVKKLAPNGVLNSSYGMT-----------EVG 336
            .| ..|.:.....:|..|.|   .:.:|.||  |||:      :...||.|           :||
Zfish   348 QP-VRPSERQHRVRLAVGNGLRPSVWEAFVERFRVKQ------IGEFYGATGCNCSIANMDGKVG 405

  Fly   337 FIVFNHGHLKLTAAGNPLPGIQVKIVD-------------------DDGNQLG-VNQTGEIIVHN 381
            ...||...|.     |..|...||:.:                   :.|..:| :||...:...:
Zfish   406 ACGFNSRILP-----NVYPIRLVKVNEETMELVRDKQGLCVSCRPGEPGLLVGRINQQDPLRRFD 465

  Fly   382 GFSWNGYFADPEATK------AMQDEEGWFHTGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAE 440
            |      :|..|||:      ..:..:..:.:||:...||..|:|..||..:..:|||..:...|
Zfish   466 G------YASQEATRKKIAYNVFRKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRWKGENVSTTE 524

  Fly   441 VEAVIDELPEVKRVCVIGVYDETQGDVPGA------LVVREDNATLTAQQVIDHVAKRLPDIQKQ 499
            ||..:..|.....|.|.||      :|||.      ..:.:...:......:..|.:.||.    
Zfish   525 VEGTLSGLLRQTDVAVFGV------NVPGVEGKAGMAAIADSTGSFNCNSFLKEVQQALPP---- 579

  Fly   500 LRAGVQFADEIPQNHNGKVVRRYARDLFVAL 530
                                  |||.:|:.:
Zfish   580 ----------------------YARPIFLRI 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 125/609 (21%)
AFD_class_I 46..518 CDD:302604 118/570 (21%)
slc27a1aNP_001013555.1 PRK08279 75..647 CDD:236217 125/609 (21%)
AFD_class_I 101..612 CDD:302604 122/577 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583008
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.