DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and Acsl4

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_997508.1 Gene:Acsl4 / 50790 MGIID:1354713 Length:711 Species:Mus musculus


Alignment Length:615 Identity:146/615 - (23%)
Similarity:223/615 - (36%) Gaps:152/615 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PQNNPFKPETSLGRIIFKNMR--NWPKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRGLDHKD 81
            |....||      ::|..|.:  |:.:..|::::       ||..||          :.||..|:
Mouse   110 PNGKVFK------KLILGNYKWINYLEVNCRVNN-------FGSGLT----------ALGLKPKN 151

  Fly    82 IIGISARNTTYIMPTAVACFFHGTPFQSANPILEESTLKHLYNISKPKIIFTDADHYD-KLYSA- 144
            .|.|........|..|..||.:..|..:....|....:.|..|.|:...:.|..:..: ||.:| 
Mouse   152 TIAIFCETRAEWMIAAQTCFKYNFPLVTLYATLGREAVVHGLNESEASYLITSVELLESKLKAAL 216

  Fly   145 --TSAFKPEIILTTGTKD-----------GVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTS 196
              .:..|..|.:...|.:           .:.|:::|.|  |.|....| |.:..||....::.:
Mouse   217 VDINCVKHIIYVDNKTINRAEYPEGLEIHSMQSVEELGA--KPENLSVP-PSRPTPSDMAIVMYT 278

  Fly   197 SGTTGMPKAVCI--SNDI--LTQETVFVNGY---DTIFISASLDWITGLWATIFSTVNGCTRIIS 254
            ||:||.||.|.:  ||.|  :|.:...:.|.   ||......|..:..|.|.|.....|| ||..
Mouse   279 SGSTGRPKGVMMHHSNLIAGMTGQCERIPGLGPKDTYIGYLPLAHVLELTAEISCFTYGC-RIGY 342

  Fly   255 SKPFAADYFVYLVSKYSITYALIPPEHCCSLLDCPT---ATPEKLGSLTK--------LNFGGGR 308
            |.|.........:.|.|        :..|::|. ||   |.||.:..:.|        :|:    
Mouse   343 SSPLTLSDQSSKIKKGS--------KGDCTVLK-PTLMAAVPEIMDRIYKNVMSKVQEMNY---- 394

  Fly   309 MTQAT---------VERVKK--------------------------------LAPNG-------- 324
             .|.|         :|::||                                |:|..        
Mouse   395 -VQKTLFKIGYDYKLEQIKKGYDAPLCNLILFKKVKALLGGNVRMMLSGGAPLSPQTHRFMNVCF 458

  Fly   325 --VLNSSYGMTE---VGFIV----FNHGHLKLTAAGNPLPGIQVKIVDDDGNQLGV----NQTGE 376
              .:...||:||   .|.:.    :..|.:     |.||...::|:.|.......|    |..||
Mouse   459 CCPIGQGYGLTESCGAGTVTEVTDYTTGRV-----GAPLICCEIKLKDWQEGGYTVHDKPNPRGE 518

  Fly   377 IIVHNGFSWNGYFADPEATKA--MQDEEG--WFHTGDMGYFDEDDYLYMTDRKKEVLKWK-GLQM 436
            |::.......|||.:.|.|..  ..||.|  ||.|||:|.|..|..|.:.||||:::|.: |..:
Mouse   519 IVIGGQNISMGYFKNEEKTAEDYCVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYV 583

  Fly   437 WPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALVVREDNATLTAQQVIDHVAKRLPDIQKQLR 501
            ...:|||.:...|.:..:|.....|  |..|...:|..:...||.|||  ..|.....||.....
Mouse   584 SLGKVEAALKNCPLIDNICAFAKSD--QSYVISFVVPNQKKLTLLAQQ--KGVEGSWVDICNNPA 644

  Fly   502 AGVQFADEIPQNHNGKVVRRYARDLFVALS 531
            ...:...||.:..|...:.|:...:.|.||
Mouse   645 MEAEILKEIREAANAMKLERFEIPIKVRLS 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 143/611 (23%)
AFD_class_I 46..518 CDD:302604 136/571 (24%)
Acsl4NP_997508.1 LC_FACS_euk1 121..696 CDD:341294 142/598 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839030
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.