DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and Acsf3

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_574249.5 Gene:Acsf3 / 498962 RGDID:1586037 Length:583 Species:Rattus norvegicus


Alignment Length:556 Identity:126/556 - (22%)
Similarity:209/556 - (37%) Gaps:148/556 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 TFGQALTWAIRIAQQLKS-RG-----LDHKDIIGISARNTTYIMPTAVACFFHG--TPFQSANPI 113
            |:.:....::.:||::.| ||     |..:.:..:.:.:.:|::....:....|  .|....:| 
  Rat    67 TYRELYDRSLCLAQEICSLRGCKVGDLQEERVSFLCSNDVSYVIAQWASWMSGGVAVPLYRKHP- 130

  Fly   114 LEESTLKHLYNISKPKIIFTDADHYDKLYS-ATSAFKPEIILTTGTKDGVLSIQDLLAPTKTEFF 177
              |:.|::....|:..::....::.::|.. |.....|.:.||.....|.       |....|  
  Rat   131 --EAQLEYFIQDSRSSVVVVGQEYLERLSPLAQRLGVPLLPLTPAVYHGA-------AEKPIE-- 184

  Fly   178 YQPTPLKEGPSQTVAILTSSGTTGMPK-AVCISNDILTQETVFVNGY-----DTIFISASLDWIT 236
             ||...:|...:...|..:|||||.|| |:....::....|..|:.:     |.|.....|..:.
  Rat   185 -QPIQEREWRDRGAMIFYTSGTTGRPKGALSTHRNLAAVVTGLVHSWAWTKNDVILHVLPLHHVH 248

  Fly   237 G--------LW--ATI-----FSTVNGCTRIISSKPFAADYFVYLVSKYSITYALIPPEHCCSLL 286
            |        ||  ||.     ||......:.:||:....:.|:.:.:.||               
  Rat   249 GVVNKLLCPLWVGATCVMLPEFSAQQVWEKFLSSEAPQINMFMAVPTIYS--------------- 298

  Fly   287 DCPTATPEKLGSLTKLNFGGGRMTQATV---------ERVK-----------------KLAPNGV 325
                    ||     |::.....||:.|         ||::                 |.|....
  Rat   299 --------KL-----LDYYDRHFTQSHVQDFVRAVCKERIRLMVSGSAALPVPLLEKWKSATGHT 350

  Fly   326 LNSSYGMTEVGFIVFNHGHLKLTAA------GNPLPGIQVKIVDD------------DGNQLGVN 372
            |...|||||:|..:.|    .||.|      |.||||::|:||.:            :||..|..
  Rat   351 LLERYGMTEIGMALSN----PLTEARVPGSVGTPLPGVEVRIVSENPQKGSSYTIHAEGNMRGTK 411

  Fly   373 QT-------GEIIVHNGFSWNGYFADPEATKAMQDEEGWFHTGDMGYFDEDDYLYMTDRKKEVLK 430
            .|       ||::|.....:..|:..||.||:....:|||.|||...|.:|.|........:::|
  Rat   412 VTPGFEEKEGELLVKGPSVFQEYWDKPEETKSAFTPDGWFRTGDTAVFKDDRYWIRGRTSVDIIK 476

  Fly   431 WKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALVVREDNATLTAQQVIDHVAKRLPD 495
            ..|.::...|:|..:...|.:..|.||||.|.|.|....|:|..::..:|:.:.:          
  Rat   477 TGGYKVSALEIERHLLAHPSITDVAVIGVPDMTWGQRVTAVVALQEGHSLSHRDL---------- 531

  Fly   496 IQKQLRAGV----------QFADEIPQNHNGKVVRR 521
              |:...||          ...:.||:|..|||.::
  Rat   532 --KEWARGVLAPYAVPSELLLVEAIPRNQMGKVNKK 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 126/556 (23%)
AFD_class_I 46..518 CDD:302604 124/551 (23%)
Acsf3XP_574249.5 CaiC 49..572 CDD:223395 126/556 (23%)
MCS 55..564 CDD:213307 126/553 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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