DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and Acsl

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001260810.1 Gene:Acsl / 46068 FlyBaseID:FBgn0263120 Length:728 Species:Drosophila melanogaster


Alignment Length:512 Identity:114/512 - (22%)
Similarity:200/512 - (39%) Gaps:112/512 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 TFGQALTWAIRIAQQLKSRGLDHKDIIGISARNTTYIMPTAVACFFHGTPFQSANPILEESTLKH 121
            ||.:|...|....:.|:..|...::.|.|.|......|..|..||....|..:....|.:..:.|
  Fly   148 TFTEAERTAANFGRGLRELGQKPRENIVIFAETRAEWMIAAHGCFKQAMPIVTVYATLGDDGVAH 212

  Fly   122 LYNISKPKIIFTDADHYDK--------------LYSATSAFKPEIILTTGTKDGVLSIQ-DLLAP 171
            ....::...:.|..|...|              :|......|.|   |||.|:||..:. :.:..
  Fly   213 CITETEVTTVITSHDLLPKFKTLLDKCPLVKTIIYIEDQLQKTE---TTGFKEGVKILPFNQVVK 274

  Fly   172 TKTEFFYQPTPLKEGPSQTVAILT-SSGTTGMPKAVCIS--NDILTQETVFVN-----------G 222
            |..:..::..|.|   ...:||:. :||:||.||.|.:|  |.|.|.:. ||:           |
  Fly   275 TGQDSKFEHVPPK---GDDIAIIMYTSGSTGTPKGVLLSHKNCIATMKG-FVDMVPIYPDDVLIG 335

  Fly   223 YDTI-----FISASLDWITGL---WATIFSTVN-------GC----------------------- 249
            :..:     .::.|:..:||:   ::|..:.::       ||                       
  Fly   336 FLPLAHVFELVAESVCLMTGVPIGYSTPLTLIDTSSKIKRGCKGDATVLKPTCMTSVPLILDRIS 400

  Fly   250 ----TRIISSKPFAADYFVYLVSKYSITYALIPPEHCCSLLDCPTATPEKL----------GSLT 300
                .::.|...|....|.:|. :|.:.:  :...:...|:|       ||          |.:.
  Fly   401 KGINDKVNSGSAFKKSLFKFLY-QYKVKW--VQRGYKTPLID-------KLVFKKVAKLMGGKVR 455

  Fly   301 KLNFGGGRMTQATVERVKKLAPNGVLNSSYGMTEV--GFIVFNHGHLKLTAAGNPLPGIQVKIVD 363
            .:..||..::..|.|::|......:: ..||:||.  |..|.::..:.....|.||....:::|:
  Fly   456 IIMSGGAPLSADTHEQIKTCLCLELI-QGYGLTETTSGATVMDYRDMTYGRTGGPLTVCDIRLVN 519

  Fly   364 -DDGNQLGVNQ---TGEIIVHNGFSWNGYFADPEATKA---MQDEEGWFHTGDMGYFDEDDYLYM 421
             ::||....|:   .||:::.......||:..|..|..   .:|.:.||.|||:|....|..|.:
  Fly   520 WEEGNYRVTNKPYPQGEVLIGGECVSQGYYKLPGKTNEDFFEEDGQRWFKTGDIGEIQADGVLKI 584

  Fly   422 TDRKKEVLKWK-GLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALVVREDN 477
            .||||:::|.: |..:...:||:.:.....::.:||.|  |.|: ....||||...|
  Fly   585 IDRKKDLVKLQAGEYVSLGKVESELKTCGIIENICVYG--DPTK-QYTVALVVPNQN 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 114/512 (22%)
AFD_class_I 46..518 CDD:302604 114/512 (22%)
AcslNP_001260810.1 PLN02387 95..727 CDD:215217 114/512 (22%)
LC-FACS_euk 142..726 CDD:213293 114/512 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452191
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.