DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and bgm

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster


Alignment Length:550 Identity:109/550 - (19%)
Similarity:195/550 - (35%) Gaps:150/550 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GIPQNNPFKPETSLGRIIFKNMRNWP----KNVCQISDSEGVE-VTFGQALTWAIRIAQQLKSRG 76
            ||....|......|.|.: .|..::|    ||     ...|.. ||:.|......::|:.....|
  Fly    39 GIGAEEPISVPGLLKRTV-NNYGDYPALRTKN-----GKNGYHTVTYKQYEQKVHQVAKAFIKLG 97

  Fly    77 LDHKDIIGISARNTTYIMPTAVACFFHGTPFQSANPILEESTLKHLYNISKPKIIFT-DADHYDK 140
            |:....:|:.|.|......:|:....................::|:...|..:|:.. ||...||
  Fly    98 LEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVQHVLESSHAQIVVVDDAKQMDK 162

  Fly   141 LYSATSAFKPEIILTTGTKDGVLSIQDLLAP--TKTEFFYQPTPLKE-----------------G 186
            :::..... |::       ...:.||:..:|  .|.:.:|:.:.::.                 .
  Fly   163 IHAIRDKL-PKL-------KAAIQIQEPYSPYLKKEDGYYRWSEIESMNVSDVEDQYMTRLENVA 219

  Fly   187 PSQTVAILTSSGTTGMPKAVCISNDILTQETVFVNGYDTIFISASLDWITGLWATIFSTVNGCTR 251
            .::...::.:|||.||||.|.:|:|.:|        :|...|..::|.:          |.|...
  Fly   220 INECCCLVYTSGTVGMPKGVMLSHDNIT--------FDVRGIVKAMDRV----------VVGAES 266

  Fly   252 IISSKPFA------ADYF--------VYLVSKYSITYALIPPEHCCSLLDC-PT----------- 290
            |:|..|.:      .|.:        ::...|.::...|:.     ||.|. ||           
  Fly   267 IVSYLPLSHVAAQTVDIYTCAFVAGCIWFADKDALKGTLVK-----SLQDARPTRFMGVPRVYEK 326

  Fly   291 ------ATPEKLGSLTKL-------------------NFGG-----------GRMTQAT-VERVK 318
                  |.....|||.|:                   :.||           .::.||. .:||.
  Fly   327 FQERMVAVASSSGSLKKMLASWAKGITLKHYMVSQGKSSGGFRYKIAKSLIMSKVKQALGFDRVL 391

  Fly   319 KLAPNGV----------------LNSSYGMTEVG--FIVFNHGHLKLTAAGNPLPGIQVKIVDDD 365
            .||....                :..::||:|..  ..:.....:.|...|..|||.:.|.::.|
  Fly   392 TLASAAAPMSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFINKD 456

  Fly   366 GNQLGVNQTGEIIVHNGFSWNGYFADPEATKAMQDEEGWFHTGDMGYFDEDDYLYMTDRKKEVLK 430
                 .|..||:.:.....:.||..:.|.|:...|::.|.|:||:|:.|:..|:.:|.|.||::.
  Fly   457 -----ANGHGELCIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRSKEIII 516

  Fly   431 WKGLQ-MWPAEVEAVI-DELPEVKRVCVIG 458
            ..|.: :.|..:|..| .||..:....::|
  Fly   517 TAGGENIPPVHIENTIKKELDAISNAFLVG 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 107/548 (20%)
AFD_class_I 46..518 CDD:302604 99/516 (19%)
bgmNP_001285923.1 FAA1 32..666 CDD:223953 108/549 (20%)
ACSBG_like 69..665 CDD:213299 100/518 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452232
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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