DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and CG11407

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_650831.1 Gene:CG11407 / 42354 FlyBaseID:FBgn0038733 Length:538 Species:Drosophila melanogaster


Alignment Length:530 Identity:201/530 - (37%)
Similarity:311/530 - (58%) Gaps:9/530 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PCS-YDAENKIWKGIPQNNPFKPETSLGRIIFKNMRNWPKNVCQISDSEGVEVTFGQALTWAIRI 68
            |.| |||:.|||.|......|.|..|:|.|||..||..|:.:.|||.:|...:|..:....|:.|
  Fly     5 PASYYDADRKIWSGDQLEYYFDPHLSIGEIIFNEMRRHPQLIAQISATENTILTRAELQANAMHI 69

  Fly    69 AQQLKSRGLDHKDIIGISARNTTYIMPTAVACFFHGTPFQSANPILEESTLKHLYNISKPKIIFT 133
            |..::|.||...||:||.|||||:|...|.||||:|..|.|.|...|:||::.|::|::|.|||.
  Fly    70 ASYMRSLGLLQMDIVGIIARNTTHISAVAYACFFNGIAFHSLNISYEQSTIEKLFSITRPNIIFC 134

  Fly   134 DADHYDKLYSATSAFKPEIILTTGTKDGVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSG 198
            |.|.::|:.|||:....:||.......|.:.|..:|: |..|..:||..|::|..||:|||.|||
  Fly   135 DGDEFEKVRSATAQLDVKIITMRNHPSGSIRIDQVLS-TPIEKNFQPVRLEQGNDQTLAILCSSG 198

  Fly   199 TTGMPKAVCISND---ILTQETVFVNGYDTIFISASLDWITGLWATIFSTVNGCTRIISSKPFAA 260
            |||:||||.|:|.   :.:..::..|  |..:..::|||||||..|:.|.|....|||:...|..
  Fly   199 TTGIPKAVTITNSRQILNSSHSLTTN--DVQYSHSTLDWITGLLTTVTSGVFSTKRIIADNIFDP 261

  Fly   261 DYFVYLVSKYSITYALIPPEHCCSLLDCPTATPEKLGSLTKLNFGGGRMTQATVERVKKLAPNGV 325
            ::|:.||.::.||:.:..|.|...:::.|:.|...|.||....|||.|.:..|..|::.......
  Fly   262 EFFMRLVEEHQITWIIQAPAHMAMMVNSPSFTTSDLSSLRYYLFGGSRASVETQHRIRSRLSKDC 326

  Fly   326 LNSSYGMTEVGFIVFNHGHL--KLTAAGNPLPGIQVKIVDDDGNQLGVNQTGEIIVHNGFSWNGY 388
            |:.:||.||:|.:...:.|.  |..:.|..:.|:::|::.:.|..||.::.||:.:.||..|.||
  Fly   327 LHFAYGFTELGSMAALNLHFDEKPNSVGRLVAGLKLKVICEKGESLGPDEVGELCLWNGQYWAGY 391

  Fly   389 FADPEATKAMQDEEGWFHTGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKR 453
            :.:||.|..|:|...||||||:||.|:|.::|:.:|||::||::.:..:|.|:|:||.::|:|..
  Fly   392 YGNPEETHKMRDHHNWFHTGDLGYVDDDGFIYIVERKKDMLKFQNIMYYPNEIESVISKMPDVVE 456

  Fly   454 VCVIGVYDETQGDVPGALVVREDNATLTAQQVIDHVAKRLPDIQKQLRAGVQFADEIPQNHNGKV 518
            |||.||::|..||...|.||::..:.||||.::|:|...:....|||..|....:::.::.|||.
  Fly   457 VCVFGVWNEINGDEATAAVVKKRGSALTAQDIVDYVETHIDAKYKQLNGGAIIVEDLVRSPNGKT 521

  Fly   519 VRRYARDLFV 528
            .|...:..|:
  Fly   522 NRMANKAFFL 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 192/516 (37%)
AFD_class_I 46..518 CDD:302604 179/476 (38%)
CG11407NP_650831.1 CaiC 26..523 CDD:223395 189/499 (38%)
Firefly_Luc_like 47..522 CDD:213279 180/477 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471314
Domainoid 1 1.000 215 1.000 Domainoid score I5876
eggNOG 1 0.900 - - E1_COG0318
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26958
OrthoDB 1 1.010 - - D24284at7147
OrthoFinder 1 1.000 - - FOG0004528
OrthoInspector 1 1.000 - - mtm9651
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X778
109.860

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