DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4830 and Acsm5

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001014184.3 Gene:Acsm5 / 361637 RGDID:1309578 Length:578 Species:Rattus norvegicus


Alignment Length:474 Identity:124/474 - (26%)
Similarity:194/474 - (40%) Gaps:74/474 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 TAVACFFHGTPFQSANPILEESTLKHLYNISKPKIIFTD---ADHYDKLYSATSAFKPEIILTTG 157
            |.|||...|.........|.:..||:....::.|.|.|.   |.|.|.:.:...:.:..::::..
  Rat   130 TIVACMRTGVVMIPGISQLTQKDLKYRLQAARVKSIITSDALAPHVDAISADCPSLQSRLLVSDT 194

  Fly   158 TKDGVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSGTTGMPKAVCISN------------ 210
            ::.|.::.::||.....|.    ..|:.....::||..:|||||.||.|..|.            
  Rat   195 SRPGWINFRELLRVASPEH----NCLRTRSGDSMAIYFTSGTTGTPKMVEHSQCSYGLGFVASGR 255

  Fly   211 --DILTQETVFVNGYDTIFISASLDWITGLWATIFST-VNGCTRIISSKP-FAADYFVYLVSKYS 271
              ..||:..:|.|..||       .|:...| |:||. .||....:...| ..|...:..:.::.
  Rat   256 RLMALTESDIFWNTTDT-------GWVKAAW-TLFSAWANGACVFVHELPQVDAQTILNTLCRFP 312

  Fly   272 ITYALIPPEHCCSLLDCPT----ATPEKLGSLTKLNF-------GGGRMTQATVERVKKLAPNGV 325
            ||..      ||    .||    ...|   .||:..|       .||....:.|....|......
  Rat   313 ITTI------CC----VPTLFRLLVQE---DLTRYKFQCLRHCLAGGEALNSDVRDKWKNQTGLE 364

  Fly   326 LNSSYGMTEVGFIV--FNHGHLKLTAAGNPLPGIQVKIVDDDGNQLGVNQTGEIIVH----NGFS 384
            ::..||.:|...|.  |....:|..:.|...|...|:|||::||.|...:.|.|.:.    ..|.
  Rat   365 IHEGYGQSETVLICGNFRGSTIKSGSMGKASPPYDVQIVDEEGNVLPPGKEGNIAIRIKPTRPFC 429

  Fly   385 -WNGYFADPEATKAMQDEEGWFH-TGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDE 447
             :|.|..:||.|.|  .|:|.|: |||..:.|||.|.:...|..:|:.....::.|.|||:.:.|
  Rat   430 LFNCYLDNPEKTAA--SEQGDFYITGDRAHMDEDGYFWFVGRNDDVINSSSYRIGPVEVESALAE 492

  Fly   448 LPEVKRVCVIGVYDETQGDVPGALV------VREDNATLTAQQVIDHVAKRLPDIQKQLRAGVQF 506
            .|.|....|:...|..:|:|..|.:      |..|...|| :::.:|| |.:....|..|. |.|
  Rat   493 HPAVLESAVVSSPDPIRGEVVKAFIVLSPAYVSHDPEALT-RELQEHV-KTVTAPYKYPRK-VAF 554

  Fly   507 ADEIPQNHNGKVVRRYARD 525
            ..|:|:..:||::|...|:
  Rat   555 ISELPKTVSGKILRSKLRN 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 124/474 (26%)
AFD_class_I 46..518 CDD:302604 121/465 (26%)
Acsm5NP_001014184.3 AFD_class_I 48..576 CDD:418409 124/474 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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