DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and acs-2

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_506869.1 Gene:acs-2 / 3565680 WormBaseID:WBGene00009221 Length:618 Species:Caenorhabditis elegans


Alignment Length:575 Identity:131/575 - (22%)
Similarity:221/575 - (38%) Gaps:94/575 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NNPFKPETSLGRIIFKNMRNWP-KNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRGLDHKDIIG 84
            |.|.:.|| ||:.:.......| |..|..| ...:..|:.:......::|..|.:.||:..|.:|
 Worm    53 NIPLRNET-LGQTLRNTTERVPDKEFCVFS-KYPIRKTYEEFYHDVRQMAASLYTLGLEKGDRVG 115

  Fly    85 ISARNTTYIMPTAVACFFHGTPFQSANPILEESTLKHLYNISKPKIIFTDADHYDKLYSAT---- 145
            :...|....:....||.|.|....:.||......|:.:...:..|::|....|....|..|    
 Worm   116 VWGPNYYEWVVLQYACAFAGVIQVNVNPHYLHEELRFVMRKTGMKVLFAPKRHKHSNYVHTMLEA 180

  Fly   146 ---------------SAFKPEI--ILTTGTK---DGVLSIQDLL--APTKTEFFYQPTPLKEGPS 188
                           |...||:  |:..|..   .|.....||:  |.:......:....|..|.
 Worm   181 MPEMRRGQPGVGHIKSHDIPELRHIVLYGDDVPVHGAWVYSDLIHAAGSAERAKLEDMDRKLRPD 245

  Fly   189 QTVAILTSSGTTGMPKAVCISNDILTQETVFVN---GYD----TIFISASLDWITGLWATIFSTV 246
            :.|.:..:|||||.||...:::..|.....|..   |:|    .|.|...|....|....:.:.|
 Worm   246 EPVNMQFTSGTTGHPKGATLTHFGLNNNAYFAGIRLGWDREDHRICIPNPLYHCFGCAVGVINAV 310

  Fly   247 N-GCTRIISSKPF-AADYFVYLVSKYSITYALIPPEHCCSLLDCPTATPEKLGSLTKLNF----- 304
            | |.|.:..||.: ..|.|           ..|..|.|.::...||...:.|.|.....|     
 Worm   311 NHGQTVVFPSKSYHVPDIF-----------EAIQNEKCTTMFGTPTMFIDVLKSPLMKQFDISSL 364

  Fly   305 -----GGGRMTQATVERVKKLAPNGVLNSSYGMTEVG-FIVFNHGHL----KLTAAGNPLPGIQV 359
                 ||.....|..|::.|.......:..||.||.. .:..:..|:    ::.:.|:.:|..::
 Worm   365 RGGVIGGAPCPMALCEKMVKEMRMTDFSVIYGSTETSPLVTMSELHVDPFERIKSVGSVMPHQEL 429

  Fly   360 KIVDDDGNQLGVNQTGEIIVHNGFSWNGYFADPEATKAMQDEEGWFHTGDMGYFDEDDYLYMTDR 424
            .|||:.|..:.....||:......:..||:||.:.|......:.|:.:||....:||..:.:..|
 Worm   430 AIVDEFGVPVPTGAKGELWSRGYSTMLGYWADHDKTNLAITRDRWYKSGDTATMNEDGTINIVGR 494

  Fly   425 KKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALV-VR-EDNATLTAQQVID 487
            .::::...|..::|.|:|..:.:|..|....|:||.|:..|:...|.| :| ||...:||    :
 Worm   495 TRDMIVKGGENVYPTEIEQFLHKLDYVADAHVVGVPDDRYGENICAWVRLRVEDEGKITA----E 555

  Fly   488 HVAK---------RLPD---IQKQLRAGVQFADEIPQNHNGKV----VRRYARDL 526
            |:.|         ::|.   |:|:        .|.|...:|||    :::.:::|
 Worm   556 HIKKACKRGMAHYKVPKYVLIKKE--------SEFPLTISGKVKKFEIQKISKEL 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 131/575 (23%)
AFD_class_I 46..518 CDD:302604 120/535 (22%)
acs-2NP_506869.1 PRK08315 46..609 CDD:236236 131/575 (23%)
FACL_like_2 244..595 CDD:213284 90/373 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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