DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4830 and Slc27a4

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001094176.1 Gene:Slc27a4 / 311839 RGDID:1307383 Length:643 Species:Rattus norvegicus


Alignment Length:569 Identity:125/569 - (21%)
Similarity:200/569 - (35%) Gaps:148/569 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 MRNWPKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRGLDHKDIIGISARNTTYIMPTAVACFF 102
            :|..|.....|.:......||.|...::..:|..|::|||...:::.:...|....:...:....
  Rat    84 VRRHPDKTALIFEGTNTHWTFRQLDDYSSSVANFLQARGLVSGNVVALFMENRNEFVGLWLGMAK 148

  Fly   103 HGTPFQSANPILEESTLKHLYNISKPKIIFTDADHYDKLYSATSAFKPEIIL-TTGTKDGVLSIQ 166
            .|......|..|....|:|..:.||.:.:...::....:|...:...|.:.| .:|      |.:
  Rat   149 LGVEAALINTNLRRDALRHCLDTSKARALIFGSEMASAVYEIQAILDPTLTLFCSG------SWE 207

  Fly   167 DLLAPTKTEFF---------YQPTPLKEGPSQTVAILTSSGTTGMPKAVCI-------------- 208
            ....|..||..         :.|:...:|.:..:..:.:|||||:|||..:              
  Rat   208 PSTVPANTEHLDPLLEDAPKHLPSIPDKGFTDKLFYIYTSGTTGLPKAAIVVHSRYYRMAALVYY 272

  Fly   209 -----SNDILTQETVFVNGYDTIFISASLDWITGLWATIFSTVNGCTRIISSKPFAADYFVYLVS 268
                 .:||:         ||.:.:..|...|.|:...:   ::|.|.:|..| |:|..|.....
  Rat   273 GFRMRPDDIV---------YDCLPLYHSAGNIVGIGQCV---LHGMTVVIRKK-FSASRFWDDCI 324

  Fly   269 KYSITYALIPPEHCCSLLDCPTATPEKLGSLTKLNFGGGRMTQATVERVKKLAPNGVLNS----- 328
            ||:.|......|.|..||:.|   |.:..|..|:....|               ||:..|     
  Rat   325 KYNCTIVQYIGELCRYLLNQP---PREAESRHKVRMALG---------------NGLRQSIWTDF 371

  Fly   329 -----------SYGMTE-----------VGFIVFNHGHLKLTAAGNPLPGIQVKIVDDDGNQL-- 369
                       .||.||           ||...||...|.....      |::..|::|..:|  
  Rat   372 SSRFHIPQVAEFYGATECNCSLGNFDSQVGACGFNSRILSFVYP------IRLVRVNEDTMELIR 430

  Fly   370 ---GV------NQTGEIIVH----------NGFSWNGYFADPEATKAMQDEEGWFHTGDMGYFDE 415
               ||      .|.|:::..          :|:...|......|:...:..:..:.|||:...||
  Rat   431 GPDGVCIPCQPGQPGQLVGRIIQQDPLRRFDGYLNQGANNKKIASDVFKKGDQAYLTGDVLVMDE 495

  Fly   416 DDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALVVREDNATL 480
            ..|||..||..:..:|||..:...|||..:..|.::..|.|.||      :||||    |..|.:
  Rat   496 LGYLYFRDRTGDTFRWKGENVSTTEVEGTLSRLLQMADVAVYGV------EVPGA----EGRAGM 550

  Fly   481 TAQQVIDHVAKRLPDIQKQLRAGVQ-FADEIPQNHNGKVVRRYARDLFV 528
            .|      ||.  |.....|.:..| ...|:|         .|||.:|:
  Rat   551 AA------VAS--PTSNCDLESFAQTLKKELP---------LYARPIFL 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 125/569 (22%)
AFD_class_I 46..518 CDD:302604 119/549 (22%)
Slc27a4NP_001094176.1 PRK08279 75..643 CDD:236217 125/569 (22%)
hsFATP4_like 99..608 CDD:213305 122/554 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343026
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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