DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and Slc27a6

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001099615.1 Gene:Slc27a6 / 291582 RGDID:1311977 Length:619 Species:Rattus norvegicus


Alignment Length:558 Identity:121/558 - (21%)
Similarity:188/558 - (33%) Gaps:174/558 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RNWPKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRG-LDHKDIIGISARNTTYIMPTAVACFF 102
            |..||....|  .||...|:......:.|:|..|.:.. |...|::.:...|.    |..|..:|
  Rat    65 RRQPKKAFII--YEGDVYTYEDVDKRSNRVAHALLNHSDLKRGDVVALLMSNE----PDFVHVWF 123

  Fly   103 H----GTPFQSANPILEESTLKHLYNISKPKIIFTDADHYDKLYSATSAFKPEIILTTGTKD--- 160
            .    |......|..|...:|.|....|:||.:....|....|.....:. |:.|...|.||   
  Rat   124 GLAKLGCVVAFLNSNLRFESLLHCIRTSEPKAMVVGEDLLGSLEEILPSL-PKHIRVWGMKDSVP 187

  Fly   161 -GVLSIQDLLAPTKTEFFYQPTPLKEGPS--------QTVAILTSSGTTGMPKAVCISNDILTQE 216
             |::|:::.|:....|    |.|    ||        .|...:.:|||||:|||..||     |.
  Rat   188 EGIVSLKEKLSLASDE----PVP----PSHHVTSSLKSTCLYIFTSGTTGLPKAAVIS-----QF 239

  Fly   217 TVFVNGYDTIFISASLDWITGLWA-------TIFST------------VNGCTRI----ISSKPF 258
            .|....:             ||||       .::.|            :.||..:    :..|.|
  Rat   240 QVLKGSF-------------GLWAFGCTADDIVYITLPLYHSSGALLGIGGCVELGATCVLKKKF 291

  Fly   259 AADYFVYLVSKYSITYALIPPEHCCSLLDCPTATPEKLGSLTKLNFGGGRMTQATVERVKKLAPN 323
            :|..|.....||::|......|.|..|...|....|| ....:|..|.|..:....:.:.:.. |
  Rat   292 SASQFWNDCRKYNVTVFQYIGELCRYLCKQPQREGEK-DHRVRLAVGNGMSSDVWRQFLDRFG-N 354

  Fly   324 GVLNSSYGMTEVGFIVFNHGHLKLTAAGNPLPGIQVKIVDDDGNQLGVNQTGEI--IVHNGFSWN 386
            ..:...||.||                               ||...:|.||:|  :....|.:|
  Rat   355 IKMCEFYGATE-------------------------------GNICFMNHTGKIGSVGRVNFFYN 388

  Fly   387 GYFA------DPEATKAMQDEEGW----------------------------------------- 404
            ..|:      |.:..:.:::|:||                                         
  Rat   389 LLFSFELIKYDFQKDEPLRNEQGWCYCVRKGEPGLLVSRVNKKNPFFGYTGSYKQTKSKLLFDVF 453

  Fly   405 ------FHTGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGVYDET 463
                  |:|||:.:.|.:::||..||..:..:|||..:...||..|:..|..::...|.||    
  Rat   454 KKGDVYFNTGDLMFQDHENFLYFWDRIGDTFRWKGENVATTEVANVLGRLDFIQEANVYGV---- 514

  Fly   464 QGDVPG-------ALVVREDNATLTAQQVIDHVAKRLP 494
              .|||       ..::.:.|.:|..:::.|.|...||
  Rat   515 --PVPGYEGKAGMTSIILKPNKSLDLEKMYDQVVTSLP 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 121/558 (22%)
AFD_class_I 46..518 CDD:302604 118/551 (21%)
Slc27a6NP_001099615.1 PRK08279 58..612 CDD:236217 121/558 (22%)
AFD_class_I 77..609 CDD:302604 116/544 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343014
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.