DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and Acsm5

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_006507967.1 Gene:Acsm5 / 272428 MGIID:2444086 Length:591 Species:Mus musculus


Alignment Length:468 Identity:125/468 - (26%)
Similarity:197/468 - (42%) Gaps:64/468 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 AVACFFHGTPFQSANPILEESTLKHLYNISKPKIIFTD---ADHYDKLYSATSAFKPEIILTTGT 158
            :|||...|.........|....||:....::.|.|.|.   |...|.:.:...:.:.:::::..:
Mouse   144 SVACMRTGVVMIPGVSQLTAKDLKYRLQAARAKSIVTSDALAPQVDAISADCPSLQTKLLVSDTS 208

  Fly   159 KDGVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSGTTGMPKAVCISND------------ 211
            :.|.::.::||.....|  :.....:.|.|  |||..:|||||.||.|..|..            
Mouse   209 RPGWINFRELLRAASPE--HNCVRTRSGDS--VAIYFTSGTTGAPKMVEHSQSSYGLGFVASGRR 269

  Fly   212 --ILTQETVFVNGYDTIFISASLDWITGLWATIFST-VNGCTRIISSKP-FAADYFVYLVSKYSI 272
              .||:..:|.|..||       .|:...| |:||. .||....:...| ..|...:..:.::.|
Mouse   270 WMALTESDIFWNTTDT-------GWVKAAW-TLFSAWSNGACIFVHELPRVDAKTILNTLCRFPI 326

  Fly   273 TYALIPPEHCC-----SLLDCPTATPEKLGSLTKLNFGGGRMTQATVERVKKLAPNGV-LNSSYG 331
            |..      ||     .||.....|..|...|.....||..:.....::.|  :..|: |:..||
Mouse   327 TTL------CCVPTLFRLLVQEDLTRYKFQCLRHCLTGGEALNPDVRDKWK--SQTGLELHEGYG 383

  Fly   332 MTEVGFIVFN--HGHLKLTAAGNPLPGIQVKIVDDDGNQLGVNQTGEIIVH----NGFS-WNGYF 389
            .:|...|..|  :..:|..:.|...|...|:|||::||.|...:.|.|.|.    ..|. :|.|.
Mouse   384 QSETVVICGNSRNSTIKSGSMGKASPPYDVQIVDEEGNVLPPGKEGNIAVRIKPTRPFCFFNCYL 448

  Fly   390 ADPEATKAMQDEEGWFH-TGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKR 453
            .:||.|.|  .|:|.|: |||..:.|||.|.:...|..:|:.....::.|.|||:.:.|.|.|..
Mouse   449 DNPEKTAA--SEQGDFYITGDRAHMDEDGYFWFLGRNDDVINSSSYRIGPVEVESALAEHPAVLE 511

  Fly   454 VCVIGVYDETQGDVPGALVV------REDNATLTAQQVIDHVAKRLPDIQKQLRAGVQFADEIPQ 512
            ..|:...|..:|:|..|.:|      ..|...|| :::.:|| |.:....|..|. |.|..|:|:
Mouse   512 SAVVSSPDPIRGEVVKAFIVLSPAYASHDPEALT-RELQEHV-KTVTAPYKYPRK-VAFISELPK 573

  Fly   513 NHNGKVVRRYARD 525
            ..:||::|...|:
Mouse   574 TVSGKILRSKLRN 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 125/468 (27%)
AFD_class_I 46..518 CDD:302604 122/459 (27%)
Acsm5XP_006507967.1 AFD_class_I 61..589 CDD:388389 125/468 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.