DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4830 and Acsl1

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_036952.1 Gene:Acsl1 / 25288 RGDID:2015 Length:699 Species:Rattus norvegicus


Alignment Length:477 Identity:108/477 - (22%)
Similarity:175/477 - (36%) Gaps:81/477 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VTFGQALTWAIRIAQQLKSRGLD--HKDIIGISARNTTYIMPTAVACFFHGTPFQSANPILEEST 118
            :::.|....|..|...|..:|..  .:..|||.::|....:.....||.:..........|....
  Rat   122 ISYKQVAEMAECIGSALIQKGFKPCSEQFIGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDA 186

  Fly   119 LKHLYNISKPKIIFTDADHYDKLY------SATSAFKPEIILTTGTKD-------------GVLS 164
            :.::.|.::..:||.|.....||.      ..|...|..:|:.:...|             |:.:
  Rat   187 ITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPCLKIIVIMDSYDNDLVERGQKCGVEIIGLKA 251

  Fly   165 IQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSGTTGMPKAVCISN-DILTQETVFVNGYDTIFI 228
            ::||....:|    :|.|.:  |.....|..:|||||.||...::: :|:...:.|:...::.||
  Rat   252 LEDLGRVNRT----KPKPPE--PEDLAIICFTSGTTGNPKGAMVTHQNIMNDCSGFIKATESAFI 310

  Fly   229 SASLDWITGL--WATIFSTVNGCTRIISSKP---FAADYFVYLVSKYSITYALIPP--------- 279
            ::..|.:...  .|.:|.||..|..:.....   |..|..: |:....:....|.|         
  Rat   311 ASPEDVLISFLPLAHMFETVVECVMLCHGAKIGFFQGDIRL-LMDDLKVLQPTIFPVVPRLLNRM 374

  Fly   280 ------EHCCS----LLDCPTATPE------------------------KLGSLTKLNFGGGRMT 310
                  :...|    |||..:...|                        .||...:|...|....
  Rat   375 FDRIFGQANTSVKRWLLDFASKRKEAELRSGIVRNNSLWDKLIFHKIQSSLGGKVRLMITGAAPV 439

  Fly   311 QATVERVKKLAPNGVLNSSYGMTE--VGFIVFNHGHLKLTAAGNPLPGIQVKIVD-DDGNQLGVN 372
            .|||....:.|........||.||  .|..:...|.......|.|:|...:|:|| :|.|.....
  Rat   440 SATVLTFLRAALGCQFYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYIKLVDVEDMNYQAAK 504

  Fly   373 QTGEIIVHNGFSWNGYFADPEATKAMQDEEGWFHTGDMGYFDEDDYLYMTDRKKEVLKW-KGLQM 436
            ..||:.|.....:.||..||..|....|::||.||||:|.:..:..|.:.||||.:.|. :|..:
  Rat   505 GEGEVCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYI 569

  Fly   437 WPAEVEAVIDELPEVKRVCVIG 458
            .|.::|.:......|.:|.|.|
  Rat   570 APEKIENIYLRSEAVAQVFVHG 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 108/477 (23%)
AFD_class_I 46..518 CDD:302604 108/477 (23%)
Acsl1NP_036952.1 LC-FACS_euk 117..695 CDD:341250 108/477 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342969
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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