DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4830 and Acsm2

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_653349.1 Gene:Acsm2 / 246263 RGDID:708383 Length:572 Species:Rattus norvegicus


Alignment Length:522 Identity:114/522 - (21%)
Similarity:198/522 - (37%) Gaps:89/522 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GQALTWAIRIAQQLKSR---------GLDHKDIIGISARNTTYIMP-------TAVACFFHGTPF 107
            |:.|.|..|...::..:         ||...|.:.:       ::|       ..:.|...|..|
  Rat    76 GEELKWNFRELSEISKQTANVLTGACGLQRGDRVAV-------VLPRVPEWWLVTLGCMRSGLVF 133

  Fly   108 QSANPILEESTLKHLYNISKPKIIFTD---ADHYDKLYSATSAFKPEIILTTGTKDGVLSIQDLL 169
            ......::.:.:.:....||.:.|...   ....|.:....|..|.:::::...::|.|:.:.||
  Rat   134 MPGTTQMKSTDILYRLQSSKARAIVAGDEVVQEVDAVAPDCSFLKIKLLVSEKNREGWLNFKALL 198

  Fly   170 APTKTEFFYQPTPLK---EGPSQ-TVAILTSSGTTGMPKAVCISNDILTQETVFVNGY------D 224
            .        ..:|:.   |..|| :.||..:|||:|.||....|:..|..:.....|:      |
  Rat   199 K--------DASPIHQCVETVSQESAAIYFTSGTSGPPKMAEHSHCSLGLKAKMDAGWTGLGPSD 255

  Fly   225 TIFISASLDWITGLWATIFS--TVNGCTRIISSKPFAADYFVYLVSKYSITYALIPPEHCCSLLD 287
            |::..:...||..:..:...  .:..|..:.....|.....:.::|.|.|...|..|.....||.
  Rat   256 TMWTISDTGWILNILGSFLEPWVLGTCIFVHLLPKFDPQTVLKVLSSYPINTLLGAPLIYRMLLQ 320

  Fly   288 CPTATPEKLGSLTKLNFGGGRMTQATVERVKKLAPNGV-LNSSYGMTEVGF-------IVFNHGH 344
             ...:..|...|.....||..:...|:|..|  |..|: :...||.||.|.       :....|:
  Rat   321 -QDLSSYKFPHLHSCFSGGETLLPETLESWK--AKTGLEIREIYGQTETGITCRVSRTMKVKPGY 382

  Fly   345 LKLTAAGNPLPGIQVKIVDDDGNQLGVNQTGEIIVH-------NGFSWNGYFADPEATKAMQDEE 402
            |     |..:....|:::|:.||.|...:.|::.:.       ..||  ||..:|:.|:|....:
  Rat   383 L-----GTAIVPYDVQVIDEQGNVLPPGKEGDMALRVKPIRPIGMFS--GYVDNPKKTQANIRGD 440

  Fly   403 GWFHTGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDV 467
            .|. .||.|..|.:.|.:...|..:::...|.::.|:|||..:.|.|.|....||...|..:.:|
  Rat   441 FWL-LGDRGIKDTEGYFHFMGRTDDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPIRREV 504

  Fly   468 PGALVVREDNATLTAQQVIDH----VAKRLPDIQKQLRA------GVQFADEIPQNHNGKVVRRY 522
            ..|.||       .|.:.:.|    :.|.|.:..|.:.|      .|:|..::|:...||:.|..
  Rat   505 VKAFVV-------LAPEFLSHDQDQLTKVLQEHVKSVTAPYKYPRKVEFVLDLPKTITGKIERAK 562

  Fly   523 AR 524
            .|
  Rat   563 LR 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 114/522 (22%)
AFD_class_I 46..518 CDD:302604 111/514 (22%)
Acsm2NP_653349.1 AFD_class_I 40..568 CDD:302604 114/522 (22%)
Acs 40..565 CDD:223442 114/522 (22%)
Coenzyme A binding. /evidence=ECO:0000250 469..471 0/1 (0%)
Coenzyme A binding. /evidence=ECO:0000250 540..542 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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