DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4830 and Dip2b

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_011243931.1 Gene:Dip2b / 239667 MGIID:2145977 Length:1619 Species:Mus musculus


Alignment Length:645 Identity:128/645 - (19%)
Similarity:220/645 - (34%) Gaps:192/645 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 IPQNNPFKPETSLGRIIFKNMRNWPKNVC-QISDSEGVEVTFGQALTW---AIRIAQQLKSRGLD 78
            |.:|:..:....|..|:....:..|.:|. .:.:::|..|.....|..   |.|||..|..:|  
Mouse  1022 IEENDLVRKHQFLAEILQWRAQATPDHVLFMLLNAKGTTVCTASCLQLHKRAERIASVLGDKG-- 1084

  Fly    79 HKDIIGISARNTTYIMPTAV-------ACFFHG------TPFQSANPILEESTLKHLYNISKPKI 130
            |.:    :..|...:.|..:       .|.:.|      .|..:.|......|::.:.::||...
Mouse  1085 HLN----AGDNVVLLYPPGIELIAAFYGCLYAGCIPVTVRPPHAQNLTATLPTVRMVVDVSKAAC 1145

  Fly   131 IFTDADHYDKLYSATSAFKPEIILTTGTKDGVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILT 195
            :.|.......|.|..:|...::    .|...::...||......:.:..|||      :.:|.|.
Mouse  1146 VLTTQTLMRLLKSREAAAAVDV----KTWPAIIDTDDLPRKRLPQLYKPPTP------EMLAYLD 1200

  Fly   196 -SSGTTGMPKAVCISNDILTQETVFVNG-----------YDTIFISASLDWITG----LWATIFS 244
             |..||||...|.:|:..       ||.           |.:..|:..||...|    ||. :.|
Mouse  1201 FSVSTTGMLTGVKMSHSA-------VNALCRAIKLQCELYSSRQIAICLDPYCGLGFALWC-LCS 1257

  Fly   245 TVNGCTRI-ISSKPFAADYFVYL--VSKYSI-----TYALIPPEHCCS----------------- 284
            ..:|...: |.......:.|::|  |::|.|     :|:::  |.|..                 
Mouse  1258 VYSGHQSVLIPPMELENNLFLWLATVNQYKIRDTFCSYSVM--ELCTKGLGNQVEVLKTRGINLS 1320

  Fly   285 -LLDCPTATPEK-----LGSLTKL--NFG----------GGRMTQA------------------- 312
             :..|.....|:     ..|.:||  :.|          |.|:..|                   
Mouse  1321 CIRTCVVVAEERPRVSLQQSFSKLFKDIGLSPRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLK 1385

  Fly   313 -----TVERVKKLAPNGVLNSSYGMTEVGFIVFNHGHLKLTAAGNPLPGIQVKIVD-DDGNQLGV 371
                 .|..|::.||..:|                    |:.:|..|||::|.||: :....:|.
Mouse  1386 SLRHDRVRLVERGAPQSLL--------------------LSESGKILPGVKVVIVNPETKGPVGD 1430

  Fly   372 NQTGEIIVHNGFSWNGYFA--DPEATKAMQ----------DEEGWFHTGDMGYF----------D 414
            :..|||.|::..:.:||:.  |.|..:|..          .:..|..||.:|:.          :
Mouse  1431 SHLGEIWVNSPHTASGYYTIYDSETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAATGE 1495

  Fly   415 EDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGVYD-------ETQGDVPGALV 472
            ..|.||:.....|.|:.:||:..|.::|..:..:......|.:..:.       |..|....|| 
Mouse  1496 RHDALYVVGALDETLELRGLRYHPIDIETSVSRVHRSIAECAVFTWTNLLVVVVELCGSEQEAL- 1559

  Fly   473 VREDNATLTAQQVIDHVAKRLPDIQKQLRAGVQFADE---IPQNHNGKVVRRYARDLFVA 529
               |...|....|::         :..|..||....:   :|.|..|:..|.:.||.|:|
Mouse  1560 ---DLVPLVTNVVLE---------EHYLIVGVVVVVDPGVVPINSRGEKQRMHLRDSFLA 1607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 127/643 (20%)
AFD_class_I 46..518 CDD:302604 117/604 (19%)
Dip2bXP_011243931.1 DMAP_binding 14..130 CDD:368923
Dip2 353..974 CDD:341231
Dip2 1050..1615 CDD:341231 122/617 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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