DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and Acsm3

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:XP_017177549.1 Gene:Acsm3 / 20216 MGIID:99538 Length:593 Species:Mus musculus


Alignment Length:535 Identity:112/535 - (20%)
Similarity:206/535 - (38%) Gaps:88/535 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GQALTWAIRIAQQLKSRGLDHKDIIGISARNTTYIMPTA-----------------------VAC 100
            |:.|.|:.              :.:|:.:|....|:..|                       |||
Mouse    84 GEELRWSF--------------EELGLLSRKFANILTEACSLQRGDRVMVILPKIPEWWLANVAC 134

  Fly   101 FFHGTPFQSANPILEESTLKHLYNISKPKIIFTD---ADHYDKLYSATSAFKPEIILTTGTKDGV 162
            ...||........|.:..:.:....||.|.|.||   |...|.:.:.......::|::..:::|.
Mouse   135 LRTGTVLIPGTTQLTQKDILYRLQSSKAKCIITDDTLAPAVDAVAAKCENLHSKLIVSQHSREGW 199

  Fly   163 LSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSGTTGMPKAVCISNDILTQETVFVNG----- 222
            .::::::.......    |.:.....:.:||..:|||||.||.:..::..... .:.|||     
Mouse   200 GNLKEMMKYASDSH----TCVDTKHDEMMAIYFTSGTTGPPKMIGHTHSSFGL-GLSVNGRFWLD 259

  Fly   223 ---YDTIFISASLDWITGLWATIFS--TVNGCTRIISSKPFAADYFVYLVSKYSITYALIPPEHC 282
               .|.::.::...|....|:::||  |...|........|.:...:..:||:.||.....|...
Mouse   260 LIASDVMWNTSDTGWAKSAWSSVFSPWTQGACVFAHYLPRFESTSILQTLSKFPITVFCSAPTAY 324

  Fly   283 CSLLDCPTATPEKLGSLTKLNFGGGRMTQATVERVKKLAPNGV-LNSSYGMTEVGFIVFNHGHLK 346
            ..|:....:...|..||......|..:....:|:.:|  ..|: :...||.||...|..|...:|
Mouse   325 RMLVQNDMSRSYKFNSLKHCVSAGEPINPEVMEQWRK--KTGLDIYEGYGQTETVLICGNFKGMK 387

  Fly   347 LT--AAGNPLPGIQVKIVDDDGNQLGVNQTGEI----IVHNGFSWNGYFADPEATKAMQDEEGWF 405
            :.  :.|.|.|...|||:|::|..|...|.|:|    :....|....::.|..:..|......::
Mouse   388 IKPGSMGKPSPAFDVKILDENGATLPPGQEGDIALQVLPERPFGLFTHYVDNPSKTASTLRGSFY 452

  Fly   406 HTGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGA 470
            .|||.||.|||.|.:...|..:::...|.::.|.|||:.:.|.|.:....|:...|..:|:|..|
Mouse   453 ITGDRGYMDEDGYFWFVARSDDIILSSGYRIGPFEVESALIEHPSIAESAVVSSPDPIRGEVVKA 517

  Fly   471 LVV-----REDNATLTAQQVIDHVAKRLPDIQKQLRAGVQ------------FADEIPQNHNGKV 518
            .:|     :..:.....:::.:||.|.....:...:.||.            |:.:|       :
Mouse   518 FIVLNPDYKSHDQEQLKKEIQEHVKKTTAPYKYPRKVGVPGTSDVSPVLWTVFSSDI-------L 575

  Fly   519 VRRYARDLFVALSKK 533
            ..|:..:|...:::|
Mouse   576 CERFQTELMTIVNQK 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 111/529 (21%)
AFD_class_I 46..518 CDD:302604 109/518 (21%)
Acsm3XP_017177549.1 AFD_class_I 48..554 CDD:388389 105/490 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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