DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and acs-9

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_510728.2 Gene:acs-9 / 188659 WormBaseID:WBGene00020634 Length:497 Species:Caenorhabditis elegans


Alignment Length:540 Identity:138/540 - (25%)
Similarity:228/540 - (42%) Gaps:99/540 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FKPETSLGRIIFKNMRNWPKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRGLDHKDIIGISAR 88
            :.|||....:|.:|:..:......:.|::  .:||.:......::..:|...|:...|.|.:...
 Worm     4 YYPETLFHDLILENVVKFGIRQALVHDNQ--VITFEEIPQLVSKLVYKLLELGISQGDTILVCLP 66

  Fly    89 NTTYIMPTAVACFFHGTPFQSANPILEEST---LKHLYNISKPKIIFTD----ADHYDKLYSATS 146
            |:.:.....::|...|.....   |..|||   :|:....|..|::||:    .::|..|...:.
 Worm    67 NSIWYPLLFLSCAKIGAVLSG---ISHESTAGEIKYSLKQSGAKLVFTNEKVSKENYWALSENSV 128

  Fly   147 AFKPEIILT-----TGTKD------GVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSGTT 200
            ...|:.:.|     ||.:|      .:.||  ||||                       .|||||
 Worm   129 EVLPDSVKTYIDRITGHEDFRPENLDIDSI--LLAP-----------------------FSSGTT 168

  Fly   201 GMPKAVCISNDILTQETVFVNG--YDTIFISASLDWI--------TGLWATIFSTVNGCTRIISS 255
            |.||...:::......|..:..  :|.:...:|:..:        :|.||.:...:.|||..|.|
 Worm   169 GAPKCCLLTHRNFLAATYSLKKFLFDQLLAQSSMKTLAFLPFHHASGFWALLICLLEGCTTYIMS 233

  Fly   256 KPFAADYFVYLVSKYSI-TYALIPPEHCCSLLDCPTATPEKLG-------SLTKLNFGGGRMTQA 312
            : |.....:.|:.||.| |..::||.....|         |:|       ||..:..|...:.:.
 Worm   234 E-FHPIVMMDLIEKYEIDTINIVPPIANIFL---------KMGILQGRCPSLRTILCGSSGLQKD 288

  Fly   313 TVERVKKLAPNGV-LNSSYGMTEVGFI----VFNHGHLKLTAAGNPLPGIQVKIVDDDGNQLGVN 372
            ..:|:..:.|... ....|||||:..:    .|:.....|.:.|:.|||.:.|:.:        :
 Worm   289 RCKRLLSIFPQVTHFIQGYGMTELVVLSCVTPFDDNFEHLGSCGHILPGFETKLFE--------H 345

  Fly   373 QTGEIIVHNGFSWNGYFADPEATK---AMQDEEGWFHTGDMGYFDEDDYLYMTDRKKEVLKWKGL 434
            .|||..:     |....|..:|.|   ...||:.|.||||: ..::..:.|:.||.|:::|..|.
 Worm   346 PTGETEL-----WLKSDAIMKAYKNGTPNLDEDDWLHTGDI-VTEKGGFFYVVDRMKDLIKLNGY 404

  Fly   435 QMWPAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALVVREDNA-TLTAQQVIDHVAKRLPDIQK 498
            |:.|.|:|.||..||:|..|.|:|:.||..|.:|.|.:|.|.|| .|...:.::|..|......|
 Worm   405 QVSPTEIENVILTLPKVAEVAVVGIEDELCGQLPKAYIVLEKNADELLFLKHLEHTMKEKLSAVK 469

  Fly   499 QLRAGVQFADEIPQNHNGKV 518
            |||.||....|:|::.:||:
 Worm   470 QLRGGVSIIKEMPKSSSGKI 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 138/540 (26%)
AFD_class_I 46..518 CDD:302604 132/516 (26%)
acs-9NP_510728.2 CaiC 1..494 CDD:223395 138/540 (26%)
Firefly_Luc_like 26..490 CDD:213279 133/518 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.880

Return to query results.
Submit another query.