DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and acs-18

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_501893.1 Gene:acs-18 / 177918 WormBaseID:WBGene00011173 Length:700 Species:Caenorhabditis elegans


Alignment Length:551 Identity:114/551 - (20%)
Similarity:206/551 - (37%) Gaps:160/551 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 WKGIPQNNPFKPETSLGRIIFKNMR---NWPKNVCQISDSEGVEVTFGQALTWAIRIAQQLKSRG 76
            :.||.:......:..||:.:.|:.:   .|              :::.||...:...:|.::..|
 Worm    85 YSGIRRGPTVGGKEMLGKRVMKDGKLEWEW--------------ISYDQAFETSDHASQAIRKLG 135

  Fly    77 LD--HKDIIGISARNTTYIMPTAVACFFHGTPFQSAN-PILEEST---LKHLYNISKPKIIFTDA 135
            ::  .:..|||.:.|....:.:.:|  .|.  |.:.: |:.:..|   :.::.|:.:..::|.||
 Worm   136 IEIGEESKIGIYSNNRPEWILSEMA--IHN--FSNVSVPLYDTITNDDMHYITNLCEISLMFVDA 196

  Fly   136 D------HYDKLYSATSAFKPEIILTTGTKDGVLSI---QDLLAPTKTEF-----------FYQP 180
            :      ..||.|.::..:   |:......|.:..:   .|....:..||           ...|
 Worm   197 EIKTKQLIRDKSYLSSLKY---IVQFNECSDDIKEMARENDFRLWSFNEFVEMGKKQKHRPHVPP 258

  Fly   181 TPLKEGPSQTVAILT-SSGTTGMPKAVCISNDILTQETV----FVN--GYDTIFIS--------- 229
            ||      :|:|.:: :|||||.||.|.:::..:...|:    |.|  |....::|         
 Worm   259 TP------ETLATISFTSGTTGRPKGVMLTHLNMCSATMSCEEFENEAGVQDAYLSYLPLAHIYE 317

  Fly   230 ----------------------ASLDWITGLWATIFSTV--------NGCTRIISSKPF------ 258
                                  ..:|.:..|....|:||        ....:.:..||.      
 Worm   318 RLCLLSNFMIGSRIGFSRGDPKLLVDDVQALAPRSFATVPRVIDKIHKAVMKQVQDKPLKKMILN 382

  Fly   259 AADYFVYLVSKYSIT-----------YALIPPEHCCSLLDCPTATPEKLGS----LTKLNFGGGR 308
            ||  ..|.:..|.:|           |.|    |...:|..|......||:    ::.:.|..|.
 Worm   383 AA--IAYKLYHYKMTGKATRKTWVDKYVL----HKIQMLLGPNIRQLILGAAKSDVSAMRFARGA 441

  Fly   309 MTQATVERVKKLAPNGVLNSSYGMTEVG-----FIVFNHGHLKLTAAGNPLPGIQVKIVDDDGNQ 368
            .....:|             .||.||..     .:|   |..::...|.|:....:|::|..  :
 Worm   442 FGVEVLE-------------GYGQTETSGPTTLQLV---GDTRIGCVGPPMACAMIKLIDVP--E 488

  Fly   369 LGVN---QTGEIIV--HNGFSWNGYFADPEATKAMQDEEGWFHTGDMGYFDEDDYLYMTDRKKEV 428
            ||.:   ..||::|  ||..|  ||:.:||||.:...|:|:..|||:|.|..:..|.:.||:|.|
 Worm   489 LGYSVDKNGGEVLVKGHNVTS--GYYKNPEATASSFTEDGYMKTGDIGRFTAEGSLQIIDRRKNV 551

  Fly   429 LKW-KGLQMWPAEVEAVIDELPEVKRVCVIG 458
            .|. :|..:.|...|::......|:::.|.|
 Worm   552 FKMPQGKFVAPDLTESLYTSSSFVQQIYVHG 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 113/548 (21%)
AFD_class_I 46..518 CDD:302604 108/517 (21%)
acs-18NP_501893.1 LC-FACS_euk 111..688 CDD:341250 109/525 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160561
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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