DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and ACSM1

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001305819.1 Gene:ACSM1 / 116285 HGNCID:18049 Length:577 Species:Homo sapiens


Alignment Length:522 Identity:125/522 - (23%)
Similarity:201/522 - (38%) Gaps:88/522 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GQALTWAIRIAQQLKSR---------GLDHKDIIGISARNTTYIMPTAVACFFHGTPFQSANPIL 114
            |..:.|:.|....|..|         ||...|.:.:...........||.|...|..|..|..:|
Human    81 GDEVKWSFREMGDLTRRVANVFTQTCGLQQGDHLALMLPRVPEWWLVAVGCMRTGIIFIPATILL 145

  Fly   115 EESTLKHLYNISKPKIIFTD---ADHYDKLYSATSAFKPEIILTTGTKDGVLSIQDLLAPTKTEF 176
            :...:.:...:||.|.|.|.   |...|.:.|...:.|.:::::..:::|.|..:.|:.....|.
Human   146 KAKDILYRLQLSKAKGIVTIDALASEVDSIASQCPSLKTKLLVSDHSREGWLDFRSLVKSASPEH 210

  Fly   177 FYQPTPLKEGPSQTVAILTSSGTTGMPKAVCISNDILTQETV-------FVNGYDTIFISASLDW 234
                |.:|......:.|..:|||||.||....|:.:..|.:.       .:...|..:..:...|
Human   211 ----TCVKSKTLDPMVIFFTSGTTGFPKMAKHSHGLALQPSFPGSRKLRSLKTSDVSWCLSDSGW 271

  Fly   235 ITG-LWATIFSTVNGCTRIISSKP-FAADYFVYLVSKYSIT--------YALI----------PP 279
            |.. :|..:.....|||..|...| |.....:..:.||.|.        |.:|          |.
Human   272 IVATIWTLVEPWTAGCTVFIHHLPQFDTKVIIQTLLKYPINHFWGVSSIYRMILQQDFTSIRFPA 336

  Fly   280 -EHCCSLLDCPTATPEKLGSLTKLNFGGGRMTQATVERVKKLAPNGVLNSSYGMTEVGFIVFNHG 343
             |||                     :.||.:.....:...|.....:|..:||.:|.|.|...:.
Human   337 LEHC---------------------YTGGEVVLPKDQEEWKRRTGLLLYENYGQSETGLICATYW 380

  Fly   344 HLKLTAA--GNPLPGIQVKIVDDDGNQLGVNQTGEI-----IVHNGFSWNGYFADPEATKAMQDE 401
            .:|:...  |...|...|:::||.|:.|..|..|.|     .|.....:..|..|||.|..::..
Human   381 GMKIKPGFMGKATPPYDVQVIDDKGSILPPNTEGNIGIRIKPVRPVSLFMCYEGDPEKTAKVECG 445

  Fly   402 EGWFHTGDMGYFDEDDYLYMTDRKKEVLKWKGLQMWPAEVEAVIDELPEVKRVCVIGVYDETQGD 466
            : :::|||.|..||:.|:....|..:::...|.::.|||||:.:.|.|.|....|:|..|..:|:
Human   446 D-FYNTGDRGKMDEEGYICFLGRSDDIINASGYRIGPAEVESALVEHPAVAESAVVGSPDPIRGE 509

  Fly   467 VPGALVVREDNATLTAQQVI---DHVAKRLPDIQKQLRA------GVQFADEIPQNHNGKVVRRY 522
            |..|.:|      ||.|.:.   |.:.|.|....|.:.|      .|:|..|:|:...||:.|:.
Human   510 VVKAFIV------LTPQFLSHDKDQLTKELQQHVKSVTAPYKYPRKVEFVSELPKTITGKIERKE 568

  Fly   523 AR 524
            .|
Human   569 LR 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 125/522 (24%)
AFD_class_I 46..518 CDD:302604 122/514 (24%)
ACSM1NP_001305819.1 MACS_euk 45..574 CDD:341251 125/522 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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