DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4830 and Acsl3

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_476448.1 Gene:Acsl3 / 114024 RGDID:70552 Length:720 Species:Rattus norvegicus


Alignment Length:543 Identity:120/543 - (22%)
Similarity:194/543 - (35%) Gaps:137/543 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NPFKPETSLGR--------------IIFKNM----RNWPKNVCQISDSEGVEVTFGQALTWAIRI 68
            |.||.:..||.              .:||.:    .||              :::......|:..
  Rat    97 NKFKDKRLLGTREILNEEDEIQPNGKVFKKVILGHYNW--------------LSYEDVFIRALDF 147

  Fly    69 AQQLKSRGLDHKDIIGISARNTTYIMPTAVACFFHGTPFQSANPILEESTLKHLYNISKPKIIFT 133
            ...|:..|...|..|.|........|..|.|||.:.....:....|....:.|..|.::...|.|
  Rat   148 GNGLQMLGQKPKANIAIFCETRAEWMIAAQACFMYNFQLVTLYATLGGPAIVHGLNETEVTNIIT 212

  Fly   134 DADHYDKLYSATSAFKPEI--ILTTGTK--------DGVL-----SIQDLLAPTKTEFFYQPTPL 183
            ..:..........:..|.:  |:|...|        .||:     ::|.|......:......||
  Rat   213 SKELLQTKLKDIVSLVPRLRHIITVDGKPPTWSEFPKGVIVHTMAAVQALGVKADVDKKAHSKPL 277

  Fly   184 KEGPSQTVAILTSSGTTGMPKAVCIS-NDILTQETVFVN-----GYDTIFIS-ASLDWITGLWAT 241
               ||....|:.:||:||:||.|.|| ::|:...|....     |.:.::|. ..|..:..|.|.
  Rat   278 ---PSDIAVIMYTSGSTGIPKGVMISHSNIIASITGMARRIPRLGEEDVYIGYLPLAHVLELSAE 339

  Fly   242 IFSTVNGCTRIISSKPFAADYFVYL---------VSKYSITYALIPPEHCCSLLD---------- 287
            :....:||....||....||....:         |.|.::..|:  ||    ::|          
  Rat   340 LVCLSHGCRIGYSSPQTLADQSSKIKKGSKGDTSVLKPTLMAAV--PE----IMDRIYKNVMNKV 398

  Fly   288 -------------------------CPTATPEK---------LGSLTKLNFGGGRMTQATVERVK 318
                                     |.|...::         ||...::...||....||.:|..
  Rat   399 NEMSAFQRNLFILAYNYKMEQISKGCSTPLCDRFVFRNVRRLLGGNIRVLLCGGAPLSATTQRFM 463

  Fly   319 KLAPNGVLNSSYGMTE---VGFIV----FNHGHLKLTAAGNPLPGIQVKIVD-DDGNQLGVNQ-- 373
            .:.....:...||:||   .|.|.    :|.|.:     |.||...::|:.: ::|.....::  
  Rat   464 NICFCCPVGQGYGLTESTGAGTITEVWDYNTGRV-----GAPLVCCEIKLKNWEEGGYFNTDKPH 523

  Fly   374 -TGEIIVHNGFSWNGYFADPEATKA--MQDEEG--WFHTGDMGYFDEDDYLYMTDRKKEVLKWK- 432
             .|||::.......||:.:...|||  .:||.|  |..|||:|.||.|..|.:.||||:::|.: 
  Rat   524 PRGEILIGGQNVTMGYYKNEAKTKADFFEDENGQRWLCTGDIGEFDPDGCLKIIDRKKDLVKLQA 588

  Fly   433 GLQMWPAEVEAVIDELPEVKRVC 455
            |..:...:|||.:..||.:..:|
  Rat   589 GEYVSLGKVEAALKNLPLIDNIC 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 120/543 (22%)
AFD_class_I 46..518 CDD:302604 111/501 (22%)
Acsl3NP_476448.1 PLN02387 30..717 CDD:215217 120/543 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342956
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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