DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4830 and acsm3

DIOPT Version :9

Sequence 1:NP_650160.1 Gene:CG4830 / 41477 FlyBaseID:FBgn0037996 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_001104706.1 Gene:acsm3 / 100002035 ZFINID:ZDB-GENE-080220-22 Length:591 Species:Danio rerio


Alignment Length:499 Identity:121/499 - (24%)
Similarity:190/499 - (38%) Gaps:118/499 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 VACFFHGTPFQSANPILEESTLKHLYNISKPKIIFTD---ADHYDKLYSATSAFKPEIILTTGTK 159
            |||...||........|....::|....|..|.:.||   |...|.:.....:...:::|:....
Zfish   141 VACIRTGTVLIPGTSQLTARDMRHRLITSGAKCVITDETLAPLLDTVALDCPSISTKLLLSHKPM 205

  Fly   160 DGVLSIQDLLAPTKTEFFYQPTPLKEGPSQTVAILTSSGTTGMPKAVCISN-------------- 210
            ||..::.:|:.....:.....|..:|    .:.|..:|||||.||....|:              
Zfish   206 DGWGNLTELMGRVSDDHVCVDTSSEE----PMTIFFTSGTTGSPKMTQHSHCSYGLGLTVNGRYW 266

  Fly   211 -DILTQETVFVNGYDTIFISASLDWITGLWATIFST-VNGCTRIISSKP-FAADYFVYLVSKYSI 272
             | ||::.||.|..||       .|....|:::|:. :.|....:...| |..:..:..:|.|.|
Zfish   267 LD-LTEQDVFWNTSDT-------GWAKSAWSSVFAPWIQGACVFVHHMPRFDTNTVLKTLSHYPI 323

  Fly   273 TYALIPP-------------------EHCCSLLDCPTATPE---KLGSLTKLNFGGGRMTQATVE 315
            |.....|                   |||  |.......||   |...||.|:...|        
Zfish   324 TTFCTAPTAYRMLVQDDLSKYKFQALEHC--LCAGEPINPEVMCKWKELTGLDIYEG-------- 378

  Fly   316 RVKKLAPNGVLNSSYGMTEVGFI--VFNHGHLKLTAAGNPLPGIQVKIVDDDGNQLGVNQTGEII 378
                          ||.||...|  .|....:|..:.|...||..|::||::|:.:...|.|::.
Zfish   379 --------------YGQTETVLIAGTFKGMKIKPGSFGKASPGYDVQVVDENGSVVPKGQEGDLG 429

  Fly   379 V----HNGFS-WNGYFADPEATKAMQDEEGWFH-TGDMGYFDEDDYLYMTDRKKEVLKWKGLQMW 437
            :    ...|| :..|..:|  .:..:...|.|: |||.|..|::.||:...|..:|:...|.::.
Zfish   430 IRVKPERPFSLFTEYTGEP--VRTAECFRGDFYLTGDRGMMDDEGYLWFIGRSDDVILSAGYRIG 492

  Fly   438 PAEVEAVIDELPEVKRVCVIGVYDETQGDVPGALVVREDNATLTAQQVIDHVAKRLPDIQKQLRA 502
            |.|||..:.|.|.|....|:...|..:|:|..|.||      |||    |..::...::.|:|:.
Zfish   493 PFEVENALIEHPAVAESAVVSSPDPVRGEVVKAFVV------LTA----DFKSRAHKELIKELQT 547

  Fly   503 GV-------------QFADEIPQNHNGKVVRRYARDLFVALSKK 533
            .|             :|.|::|:..:||:.|       |.|.||
Zfish   548 HVKSITAPYKYPRKIEFVDQLPKTVSGKIRR-------VELRKK 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4830NP_650160.1 CaiC 18..529 CDD:223395 117/493 (24%)
AFD_class_I 46..518 CDD:302604 115/482 (24%)
acsm3NP_001104706.1 Acs 54..583 CDD:223442 119/496 (24%)
AFD_class_I 57..586 CDD:302604 121/499 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D683933at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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